RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 TRUB1Q8WWH5 349 aaKnown RBP10.4□□□□□ -0.74
USB1-212ENST00000566082 CENPIQ92674 756 aaPredicted RBP10.4□□□□□ -0.74
USB1-212ENST00000566082 MYDGFQ969H8 173 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 MED8Q96G25 268 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 LRCH3Q96II8 777 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 DMRTB1Q96MA1 342 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 RANBP9Q96S59 729 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 PARK7Q99497 189 aaKnown RBP10.4□□□□□ -0.74
USB1-212ENST00000566082 FUNDC2Q9BWH2 189 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 TFB2MQ9H5Q4 396 aaKnown RBP10.4□□□□□ -0.74
USB1-212ENST00000566082 MARCH4Q9P2E8 410 aaPredicted RBP10.4□□□□□ -0.74
USB1-212ENST00000566082 RAPGEFL1Q9UHV5 662 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 COL1A2P08123 1366 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 SLC22A1O15245 554 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 TPD52L2O43399 206 aaKnown RBP10.4□□□□□ -0.74
USB1-212ENST00000566082 SERPIND1P05546 499 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 ANXA5P08758 320 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 DGKAP23743 735 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 IFNA8P32881 189 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 CRYBB1P53674 252 aaPredicted RBP10.4□□□□□ -0.74
USB1-212ENST00000566082 INHBEP58166 350 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 GHRHRQ02643 423 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 C1DQ13901 141 aaKnown RBP10.4□□□□□ -0.74
USB1-212ENST00000566082 TAF1CQ15572 869 aaPredicted RBP10.4□□□□□ -0.74
USB1-212ENST00000566082 TIMM50Q3ZCQ8 353 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 DGKKQ5KSL6 1271 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 FAM171A1Q5VUB5 890 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 GPRIN1Q7Z2K8 1008 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 STK40Q8N2I9 435 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 ARRDC4Q8NCT1 418 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 C19orf18Q8NEA5 215 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 OR7D4Q8NG98 312 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 MYRFLQ96LU7 910 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 ZNF347Q96SE7 839 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 SEZ6LQ9BYH1 1024 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 CRTAC1Q9NQ79 661 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 WDR70Q9NW82 654 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 FKBPLQ9UIM3 349 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 AP3M1Q9Y2T2 418 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 PCDHB3Q9Y5E6 796 aa10.4□□□□□ -0.74
USB1-212ENST00000566082 TCRBV3S1A0A5B6 114 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 SCELO95171 688 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 MBL2P11226 248 aaPredicted RBP10.39□□□□□ -0.75
USB1-212ENST00000566082 CD1EP15812 388 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 RHOQP17081 205 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 FUT4P22083 530 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 OPRL1P41146 370 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 IL12RB1P42701 662 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 RXRGP48443 463 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 CD97P48960 835 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 ARSDP51689 593 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 CDKN2DP55273 166 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 IRF8Q02556 426 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 VEPH1Q14D04 833 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 ATP6AP1Q15904 470 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 ZFP69Q49AA0 526 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 DUSP28Q4G0W2 176 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 PABPC1LQ4VXU2 614 aaKnown RBP10.39□□□□□ -0.75
USB1-212ENST00000566082 CXCL17Q6UXB2 119 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 MON1AQ86VX9 555 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 SNX29P2Q8IUI4 249 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 BBS7Q8IWZ6 715 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 SIX5Q8N196 739 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 MINDY1Q8N5J2 469 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 CNIH3Q8TBE1 160 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 KCTD13Q8WZ19 329 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 PHF21AQ96BD5 680 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 ITCHQ96J02 903 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 C3orf30Q96M34 536 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 NFKBIZQ9BYH8 718 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 LHPPQ9H008 270 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 DCSTAMPQ9H295 470 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 TMEM245Q9H330 911 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 MFSD1Q9H3U5 465 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 SACM1LQ9NTJ5 587 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 ARMC1Q9NVT9 282 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 TMEM181Q9P2C4 612 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 RBPJLQ9UBG7 517 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 VPS51Q9UID3 782 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 SAMD4AQ9UPU9 718 aaKnown RBP10.39□□□□□ -0.75
USB1-212ENST00000566082 MAGED1Q9Y5V3 778 aaPredicted RBP10.39□□□□□ -0.75
USB1-212ENST00000566082 DLEC1Q9Y238 1755 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 SLC28A1O00337 649 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 ZNF195O14628 629 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 PRMT5O14744 637 aaPredicted RBP10.39□□□□□ -0.75
USB1-212ENST00000566082 GABRDO14764 452 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 KPNA6O60684 536 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 TNFRSF21O75509 655 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 GRK3P35626 688 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 SOX4Q06945 474 aaPredicted RBP10.39□□□□□ -0.75
USB1-212ENST00000566082 FOXM1Q08050 763 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 TAB1Q15750 504 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 CYP4V2Q6ZWL3 525 aaPredicted RBP10.39□□□□□ -0.75
USB1-212ENST00000566082 SVOPLQ8N434 492 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 ABHD11Q8NFV4 315 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 BRSK1Q8TDC3 778 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 GTF3C2Q8WUA4 911 aaPredicted RBP10.39□□□□□ -0.75
USB1-212ENST00000566082 SH3KBP1Q96B97 665 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 OMA1Q96E52 524 aa10.39□□□□□ -0.75
USB1-212ENST00000566082 CDKN2AIPNLQ96HQ2 116 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms