RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 APEX2Q9UBZ4 518 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 ABCA5Q8WWZ7 1642 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 GCC2Q8IWJ2 1684 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 ZBTB24O43167 697 aaPredicted RBP8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 IDH2P48735 452 aaKnown RBP8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 KLF1Q13351 362 aaPredicted RBP8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 SELPLGQ14242 412 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 DUSP7Q16829 419 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 SYTL3Q4VX76 610 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 MAMDC2Q7Z304 686 aaPredicted RBP8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 ZNF561Q8N587 486 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 OR52K1Q8NGK4 314 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 CABLES1Q8TDN4 633 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 SLC47A1Q96FL8 570 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 SPACA7Q96KW9 195 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 NANOGQ9H9S0 305 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 ZDHHC7Q9NXF8 308 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 ABT1Q9ULW3 272 aaKnown RBP8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 OR6C74A6NCV1 312 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 USP17L15C9J2P7 530 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 USP17L13C9JLJ4 530 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 USP17L11C9JVI0 530 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 USP17L18D6R9N7 530 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 USP17L22D6RA61 530 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 USP17L17D6RBQ6 530 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 USP17L19D6RCP7 530 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 USP17L20D6RJB6 530 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 RFPL1O75677 317 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 SIX6O95475 246 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 SLC2A1P11166 492 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 MECP2P51608 486 aaKnown RBP8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 USP17L24Q0WX57 530 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 AVPI1Q5T686 147 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 ZNF773Q6PK81 442 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 ZDHHC24Q6UX98 284 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 LYSMD3Q7Z3D4 306 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 CDKL3Q8IVW4 592 aaPredicted RBP8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 NETO2Q8NC67 525 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 STOML3Q8TAV4 291 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 SHKBP1Q8TBC3 707 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 NPRL2Q8WTW4 380 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 ZSWIM3Q96MP5 696 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 RBM4BQ9BQ04 359 aaKnown RBP8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 RBM4Q9BWF3 364 aaKnown RBP8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 ZNF350Q9GZX5 532 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 OPN3Q9H1Y3 402 aaPredicted RBP8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 TMEM138Q9NPI0 162 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 IL20Q9NYY1 176 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 TMEM94Q12767 1356 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 ZFYVE9O95405 1425 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 ADGRL1O94910 1474 aa8.9□□□□□ -0.98
GTF2A1-203ENST00000553612 LDLRAD4O15165 306 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 PIP5K1CO60331 668 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 VAMP7P51809 220 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 XKP51811 444 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 PLA2G16P53816 162 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 KIAA1211LQ6NV74 962 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 RASGRP3Q8IV61 690 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 AP3S1Q92572 193 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 LRRC40Q9H9A6 602 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 SPHK1Q9NYA1 384 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 PCDHA6Q9UN73 950 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 PCDHB12Q9Y5F1 795 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 PCDHA8Q9Y5H6 950 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 CACNG2Q9Y698 323 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 PLCH2O75038 1416 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 SOCS2O14508 198 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 ITGB1P05556 798 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 TPH1P17752 444 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 LIFRP42702 1097 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 GPR17Q13304 367 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 C10orf107Q8IVU9 208 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 ZNF276Q8N554 614 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 BAP1Q92560 729 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 CELF6Q96J87 481 aaKnown RBP8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 SLC30A2Q9BRI3 323 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 C1QTNF6Q9BXI9 259 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 FBRSL1Q9HCM7 1045 aaKnown RBP8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 AMBNQ9NP70 447 aa8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 C14orf166Q9Y224 244 aaKnown RBP8.9□□□□□ -0.99
GTF2A1-203ENST00000553612 MYH8P13535 1937 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 TRAV19A0A0A6YYK7 116 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 UBA6A0AVT1 1052 aaPredicted RBP8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 ARGFXA6NJG6 315 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 SLC16A4O15374 487 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 PRPF4O43172 522 aaKnown RBP eCLIP8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 LRIG2O94898 1065 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 SBK2P0C263 348 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 CPT1AP50416 773 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 MAP2K6P52564 334 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 SLC16A1P53985 500 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 GPRC6AQ5T6X5 926 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 EEPD1Q7L9B9 569 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 TMEM17Q86X19 198 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 CMIPQ8IY22 773 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 NKX2-3Q8TAU0 364 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 RNFT2Q96EX2 444 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 HYLS1Q96M11 299 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 PIGQQ9BRB3 760 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 MMP27Q9H306 513 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms