RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 ZNF470Q6ECI4 717 aa19.08■□□□□ 0.64
DDX55-207ENST00000540763 IYDQ6PHW0 289 aa19.08■□□□□ 0.64
DDX55-207ENST00000540763 CNTN4Q8IWV2 1026 aa19.08■□□□□ 0.64
DDX55-207ENST00000540763 BEND7Q8N7W2 519 aaPredicted RBP19.08■□□□□ 0.64
DDX55-207ENST00000540763 P2RY12Q9H244 342 aa19.08■□□□□ 0.64
DDX55-207ENST00000540763 PLAC1Q9HBJ0 212 aa19.08■□□□□ 0.64
DDX55-207ENST00000540763 GNPTGQ9UJJ9 305 aa19.08■□□□□ 0.64
DDX55-207ENST00000540763 ACSL5Q9ULC5 683 aa19.08■□□□□ 0.64
DDX55-207ENST00000540763 DNAJC16Q9Y2G8 782 aa19.08■□□□□ 0.64
DDX55-207ENST00000540763 PCDHB1Q9Y5F3 818 aa19.08■□□□□ 0.64
DDX55-207ENST00000540763 GOLGA8KD6RF30 607 aa19.07■□□□□ 0.64
DDX55-207ENST00000540763 H3BMM5 538 aa19.07■□□□□ 0.64
DDX55-207ENST00000540763 GOLGA8TH3BQL2 631 aa19.07■□□□□ 0.64
DDX55-207ENST00000540763 TRIM16O95361 564 aa19.07■□□□□ 0.64
DDX55-207ENST00000540763 ESR1P03372 595 aa19.07■□□□□ 0.64
DDX55-207ENST00000540763 GSTA2P09210 222 aa19.07■□□□□ 0.64
DDX55-207ENST00000540763 RPA4Q13156 261 aa19.07■□□□□ 0.64
DDX55-207ENST00000540763 DNAJC3Q13217 504 aa19.07■□□□□ 0.64
DDX55-207ENST00000540763 CUL1Q13616 776 aa19.07■□□□□ 0.64
DDX55-207ENST00000540763 FASTKD3Q14CZ7 662 aaKnown RBP19.07■□□□□ 0.64
DDX55-207ENST00000540763 TRADDQ15628 312 aa19.07■□□□□ 0.64
DDX55-207ENST00000540763 ZNF449Q6P9G9 518 aa19.07■□□□□ 0.64
DDX55-207ENST00000540763 KIAA0408Q6ZU52 694 aa19.07■□□□□ 0.64
DDX55-207ENST00000540763 GALNT7Q86SF2 657 aa19.07■□□□□ 0.64
DDX55-207ENST00000540763 LDB1Q86U70 411 aaPredicted RBP19.07■□□□□ 0.64
DDX55-207ENST00000540763 GSDMBQ8TAX9 411 aa19.07■□□□□ 0.64
DDX55-207ENST00000540763 MAPK15Q8TD08 544 aa19.07■□□□□ 0.64
DDX55-207ENST00000540763 PYROXD1Q8WU10 500 aa19.07■□□□□ 0.64
DDX55-207ENST00000540763 LPGAT1Q92604 370 aa19.07■□□□□ 0.64
DDX55-207ENST00000540763 PANX3Q96QZ0 392 aa19.07■□□□□ 0.64
DDX55-207ENST00000540763 STN1Q9H668 368 aaKnown RBP19.07■□□□□ 0.64
DDX55-207ENST00000540763 SAYSD1Q9NPB0 183 aa19.07■□□□□ 0.64
DDX55-207ENST00000540763 MTRF1LQ9UGC7 380 aaKnown RBP19.07■□□□□ 0.64
DDX55-207ENST00000540763 PRSS21Q9Y6M0 314 aa19.07■□□□□ 0.64
DDX55-207ENST00000540763 PTPRBP23467 1997 aa19.06■□□□□ 0.64
DDX55-207ENST00000540763 RP1P56715 2156 aa19.06■□□□□ 0.64
DDX55-207ENST00000540763 COL27A1Q8IZC6 1860 aaPredicted RBP19.06■□□□□ 0.64
DDX55-207ENST00000540763 LIN7AO14910 233 aaPredicted RBP19.06■□□□□ 0.64
DDX55-207ENST00000540763 PBLDP30039 288 aaPredicted RBP19.06■□□□□ 0.64
DDX55-207ENST00000540763 HALP42357 657 aa19.06■□□□□ 0.64
DDX55-207ENST00000540763 SLC1A2P43004 574 aa19.06■□□□□ 0.64
DDX55-207ENST00000540763 TUBB4BP68371 445 aa19.06■□□□□ 0.64
DDX55-207ENST00000540763 E2F1Q01094 437 aa19.06■□□□□ 0.64
DDX55-207ENST00000540763 PLOD1Q02809 727 aaPredicted RBP19.06■□□□□ 0.64
DDX55-207ENST00000540763 NFE2L1Q14494 772 aa19.06■□□□□ 0.64
DDX55-207ENST00000540763 NR1D2Q14995 579 aa19.06■□□□□ 0.64
DDX55-207ENST00000540763 HSP90AA5PQ58FG0 334 aa19.06■□□□□ 0.64
DDX55-207ENST00000540763 GUSBP11Q6P575 273 aa19.06■□□□□ 0.64
DDX55-207ENST00000540763 ZNF438Q7Z4V0 828 aa19.06■□□□□ 0.64
DDX55-207ENST00000540763 SLC9B2Q86UD5 537 aa19.06■□□□□ 0.64
DDX55-207ENST00000540763 ANKMY2Q8IV38 441 aa19.06■□□□□ 0.64
DDX55-207ENST00000540763 IFI44Q8TCB0 444 aa19.06■□□□□ 0.64
DDX55-207ENST00000540763 SLC37A2Q8TED4 501 aa19.06■□□□□ 0.64
DDX55-207ENST00000540763 CFAP36Q96G28 342 aa19.06■□□□□ 0.64
DDX55-207ENST00000540763 COG4Q9H9E3 785 aa19.06■□□□□ 0.64
DDX55-207ENST00000540763 SARS2Q9NP81 518 aaKnown RBP19.06■□□□□ 0.64
DDX55-207ENST00000540763 PRDM8Q9NQV8 689 aa19.06■□□□□ 0.64
DDX55-207ENST00000540763 IL1RAPL1Q9NZN1 696 aa19.06■□□□□ 0.64
DDX55-207ENST00000540763 FBXO5Q9UKT4 447 aa19.06■□□□□ 0.64
DDX55-207ENST00000540763 PDZK1P1A8MUH7 402 aa19.05■□□□□ 0.64
DDX55-207ENST00000540763 SNX2O60749 519 aa19.05■□□□□ 0.64
DDX55-207ENST00000540763 EML2O95834 649 aa19.05■□□□□ 0.64
DDX55-207ENST00000540763 S1PR4O95977 384 aa19.05■□□□□ 0.64
DDX55-207ENST00000540763 BRAFP15056 766 aa19.05■□□□□ 0.64
DDX55-207ENST00000540763 XRCC1P18887 633 aaPredicted RBP19.05■□□□□ 0.64
DDX55-207ENST00000540763 SHC2P98077 582 aa19.05■□□□□ 0.64
DDX55-207ENST00000540763 HP1BP3Q5SSJ5 553 aaPredicted RBP19.05■□□□□ 0.64
DDX55-207ENST00000540763 XKR5Q6UX68 686 aa19.05■□□□□ 0.64
DDX55-207ENST00000540763 FAM83HQ6ZRV2 1179 aaPredicted RBP19.05■□□□□ 0.64
DDX55-207ENST00000540763 CYS1Q717R9 158 aa19.05■□□□□ 0.64
DDX55-207ENST00000540763 EFL1Q7Z2Z2 1120 aaKnown RBP19.05■□□□□ 0.64
DDX55-207ENST00000540763 RELL1Q8IUW5 271 aa19.05■□□□□ 0.64
DDX55-207ENST00000540763 IFT20Q8IY31 132 aa19.05■□□□□ 0.64
DDX55-207ENST00000540763 ARL14Q8N4G2 192 aa19.05■□□□□ 0.64
DDX55-207ENST00000540763 PNPLA1Q8N8W4 532 aa19.05■□□□□ 0.64
DDX55-207ENST00000540763 C2CD4AQ8NCU7 369 aaPredicted RBP19.05■□□□□ 0.64
DDX55-207ENST00000540763 WDR48Q8TAF3 677 aa19.05■□□□□ 0.64
DDX55-207ENST00000540763 NAT14Q8WUY8 206 aa19.05■□□□□ 0.64
DDX55-207ENST00000540763 ADAMTS14Q8WXS8 1223 aa19.05■□□□□ 0.64
DDX55-207ENST00000540763 BIRC8Q96P09 236 aa19.05■□□□□ 0.64
DDX55-207ENST00000540763 POT1Q9NUX5 634 aa19.05■□□□□ 0.64
DDX55-207ENST00000540763 MOCS1Q9NZB8 636 aa19.05■□□□□ 0.64
DDX55-207ENST00000540763 COMMD10Q9Y6G5 202 aa19.05■□□□□ 0.64
DDX55-207ENST00000540763 ASXL3Q9C0F0 2248 aa19.05■□□□□ 0.64
DDX55-207ENST00000540763 UBA6A0AVT1 1052 aaPredicted RBP19.04■□□□□ 0.64
DDX55-207ENST00000540763 KPNA5O15131 536 aa19.04■□□□□ 0.64
DDX55-207ENST00000540763 ZW10O43264 779 aa19.04■□□□□ 0.64
DDX55-207ENST00000540763 SPAG6O75602 509 aa19.04■□□□□ 0.64
DDX55-207ENST00000540763 ERVK-10P10266 1014 aa19.04■□□□□ 0.64
DDX55-207ENST00000540763 GPR3P46089 330 aa19.04■□□□□ 0.64
DDX55-207ENST00000540763 LEPRP48357 1165 aaKnown RBP19.04■□□□□ 0.64
DDX55-207ENST00000540763 EIF3BP55884 814 aaKnown RBP19.04■□□□□ 0.64
DDX55-207ENST00000540763 MAZP56270 477 aaKnown RBP19.04■□□□□ 0.64
DDX55-207ENST00000540763 UBE2IP63279 158 aaKnown RBP19.04■□□□□ 0.64
DDX55-207ENST00000540763 ILF2Q12905 390 aaKnown RBP19.04■□□□□ 0.64
DDX55-207ENST00000540763 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.04■□□□□ 0.64
DDX55-207ENST00000540763 PTRHD1Q6GMV3 140 aaKnown RBP19.04■□□□□ 0.64
DDX55-207ENST00000540763 SLCO6A1Q86UG4 719 aa19.04■□□□□ 0.64
DDX55-207ENST00000540763 DENND6AQ8IWF6 608 aa19.04■□□□□ 0.64
DDX55-207ENST00000540763 RBM12BQ8IXT5 1001 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms