RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 YME1L1Q96TA2 773 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 RNF39Q9H2S5 420 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 LTB4R2Q9NPC1 389 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 TRPV5Q9NQA5 729 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 NDFIP2Q9NV92 336 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 KLQ9UEF7 1012 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 ANKRD36A6QL64 1941 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 RRN3P2A6NIE6 340 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 AXIN1O15169 862 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 GSTA4O15217 222 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 KLK8O60259 260 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 PRKD3O94806 890 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 PEX11BO96011 259 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 CYP11A1P05108 521 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 BMP1P13497 986 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 EIF2DP41214 584 aaKnown RBP17.37■□□□□ 0.37
RAB40C-205ENST00000539661 CD86P42081 329 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 MVKQ03426 396 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 ATAD3BQ5T9A4 648 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 SPESP1Q6UW49 350 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 SVOPQ8N4V2 548 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 OR2T12Q8NG77 320 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 OR56A4Q8NGH8 313 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 DACH2Q96NX9 599 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 OSMRQ99650 979 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 MROH8Q9H579 483 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 DUSP21Q9H596 190 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 MAGIXQ9H6Y5 334 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 ACTR8Q9H981 624 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 CARS2Q9HA77 564 aaKnown RBP17.37■□□□□ 0.37
RAB40C-205ENST00000539661 VPS51Q9UID3 782 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 RBMX2Q9Y388 322 aaKnown RBP17.37■□□□□ 0.37
RAB40C-205ENST00000539661 HSPE1-MOB4S4R3N1 261 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 BPTFQ12830 3046 aa17.37■□□□□ 0.37
RAB40C-205ENST00000539661 LCHNA4D1U4 455 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 WASH4PA8MWX3 477 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 HS6ST1O60243 411 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 UPK1BO75841 260 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 ANGPTL1O95841 491 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 CCR1P32246 355 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 ALDH7A1P49419 539 aaKnown RBP17.36■□□□□ 0.37
RAB40C-205ENST00000539661 IST1P53990 364 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 ZNF181Q2M3W8 571 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 ARTNQ5T4W7 220 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 ENPP6Q6UWR7 440 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 CHAC2Q8WUX2 184 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 SENP8Q96LD8 212 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 TBATAQ96M53 351 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 SLIRPQ9GZT3 109 aaKnown RBP17.36■□□□□ 0.37
RAB40C-205ENST00000539661 HOXD1Q9GZZ0 328 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 DSN1Q9H410 356 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 EPS8L2Q9H6S3 715 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 PCTPQ9UKL6 214 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 CDH9Q9ULB4 789 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 CCL22O00626 93 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 BCKDKO14874 412 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 RGS13O14921 159 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 ECI2O75521 394 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 SCELO95171 688 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 GOT2P00505 430 aaKnown RBP17.36■□□□□ 0.37
RAB40C-205ENST00000539661 MSH3P20585 1137 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 ST13P50502 369 aaKnown RBP17.36■□□□□ 0.37
RAB40C-205ENST00000539661 VBP1P61758 197 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 SIRPB2Q5JXA9 342 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 HIPK1Q86Z02 1210 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 FIG4Q92562 907 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 FCRL2Q96LA5 508 aaPredicted RBP17.36■□□□□ 0.37
RAB40C-205ENST00000539661 FAM49AQ9H0Q0 323 aaPredicted RBP17.36■□□□□ 0.37
RAB40C-205ENST00000539661 PARVBQ9HBI1 364 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 NT5MQ9NPB1 228 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 ADGRE2Q9UHX3 823 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 ZNF225Q9UK10 706 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 PIN4Q9Y237 131 aaKnown RBP17.36■□□□□ 0.37
RAB40C-205ENST00000539661 AP3M1Q9Y2T2 418 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 TESMINQ9Y4I5 508 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 PCDHGA10Q9Y5H3 936 aa17.36■□□□□ 0.37
RAB40C-205ENST00000539661 TAF4O00268 1085 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 MMP2P08253 660 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 DCTP40126 519 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 NRG1Q02297 640 aaPredicted RBP17.35■□□□□ 0.37
RAB40C-205ENST00000539661 RAD51Q06609 339 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 FADDQ13158 208 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 SF3B4Q15427 424 aaKnown RBP eCLIP17.35■□□□□ 0.375e-9■■■■■ 30.3
RAB40C-205ENST00000539661 NKG7Q16617 165 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 NANOGNBQ7Z5D8 188 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 DCP2Q8IU60 420 aaKnown RBP17.35■□□□□ 0.37
RAB40C-205ENST00000539661 MMAAQ8IVH4 418 aaKnown RBP17.35■□□□□ 0.37
RAB40C-205ENST00000539661 FAM126BQ8IXS8 530 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 FAM86B1Q8N7N1 296 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 ARL10Q8N8L6 244 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 NAT16Q8N8M0 369 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 ZNF548Q8NEK5 533 aaPredicted RBP17.35■□□□□ 0.37
RAB40C-205ENST00000539661 FBXO30Q8TB52 745 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 C17orf80Q9BSJ5 609 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 SIAEQ9HAT2 523 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 RBPJLQ9UBG7 517 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 LIMD1Q9UGP4 676 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 OSGIN1Q9UJX0 560 aa17.35■□□□□ 0.37
RAB40C-205ENST00000539661 PRDX3P30048 256 aaKnown RBP17.35■□□□□ 0.37
RAB40C-205ENST00000539661 SLC35A2P78381 396 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms