RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 ATP1B2P14415 290 aaPredicted RBP17.84■□□□□ 0.45
VEGFA-222ENST00000520948 PLA2G2AP14555 144 aa17.84■□□□□ 0.45
VEGFA-222ENST00000520948 ZNF7P17097 686 aaPredicted RBP17.84■□□□□ 0.45
VEGFA-222ENST00000520948 AK4P27144 223 aaPredicted RBP17.84■□□□□ 0.45
VEGFA-222ENST00000520948 DUSP3P51452 185 aaPredicted RBP17.84■□□□□ 0.45
VEGFA-222ENST00000520948 LRP8Q14114 963 aa17.84■□□□□ 0.45
VEGFA-222ENST00000520948 CRYMQ14894 314 aa17.84■□□□□ 0.45
VEGFA-222ENST00000520948 FASTKD3Q14CZ7 662 aaKnown RBP17.84■□□□□ 0.45
VEGFA-222ENST00000520948 DEFB133Q30KQ1 61 aa17.84■□□□□ 0.45
VEGFA-222ENST00000520948 BCL7AQ4VC05 210 aa17.84■□□□□ 0.45
VEGFA-222ENST00000520948 C3orf38Q5JPI3 329 aa17.84■□□□□ 0.45
VEGFA-222ENST00000520948 SPANXN3Q5MJ09 141 aa17.84■□□□□ 0.45
VEGFA-222ENST00000520948 HP1BP3Q5SSJ5 553 aaPredicted RBP17.84■□□□□ 0.45
VEGFA-222ENST00000520948 ZCCHC8Q6NZY4 707 aaKnown RBP17.84■□□□□ 0.45
VEGFA-222ENST00000520948 GUSBP11Q6P575 273 aa17.84■□□□□ 0.45
VEGFA-222ENST00000520948 OGFOD3Q6PK18 319 aa17.84■□□□□ 0.45
VEGFA-222ENST00000520948 CENPUQ71F23 418 aa17.84■□□□□ 0.45
VEGFA-222ENST00000520948 CHST15Q7LFX5 561 aaPredicted RBP17.84■□□□□ 0.45
VEGFA-222ENST00000520948 GKN2Q86XP6 184 aa17.84■□□□□ 0.45
VEGFA-222ENST00000520948 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.84■□□□□ 0.45
VEGFA-222ENST00000520948 SGF29Q96ES7 293 aa17.84■□□□□ 0.45
VEGFA-222ENST00000520948 ZNF514Q96K75 400 aaPredicted RBP17.84■□□□□ 0.45
VEGFA-222ENST00000520948 LINC00615Q96LM1 132 aaPredicted RBP17.84■□□□□ 0.45
VEGFA-222ENST00000520948 DUSP23Q9BVJ7 150 aa17.84■□□□□ 0.45
VEGFA-222ENST00000520948 GSDMCQ9BYG8 508 aa17.84■□□□□ 0.45
VEGFA-222ENST00000520948 POLR1BQ9H9Y6 1135 aa17.84■□□□□ 0.45
VEGFA-222ENST00000520948 EVA1BQ9NVM1 165 aa17.84■□□□□ 0.45
VEGFA-222ENST00000520948 CHMP2BQ9UQN3 213 aa17.84■□□□□ 0.45
VEGFA-222ENST00000520948 ZFC3H1O60293 1989 aaKnown RBP17.84■□□□□ 0.45
VEGFA-222ENST00000520948 KALRNO60229 2985 aa17.83■□□□□ 0.45
VEGFA-222ENST00000520948 GOLGA8KD6RF30 607 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 GOLGA8TH3BQL2 631 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 ANXA6P08133 673 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 RALBP11234 206 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 ECHS1P30084 290 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 AKT1P31749 480 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 NSG1P42857 185 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 LSSP48449 732 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 TMPRSS3P57727 454 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 ILF3Q12906 894 aaKnown RBP eCLIP17.83■□□□□ 0.44
VEGFA-222ENST00000520948 GTF2H3Q13889 308 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 FRG1Q14331 258 aaKnown RBP17.83■□□□□ 0.44
VEGFA-222ENST00000520948 LONRF1Q17RB8 773 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 TYSND1Q2T9J0 566 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 TAF1BQ53T94 588 aaPredicted RBP17.83■□□□□ 0.44
VEGFA-222ENST00000520948 ARHGAP40Q5TG30 622 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 BROXQ5VW32 411 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 NEPROQ6NW34 567 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 UNC5AQ6ZN44 842 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 EFL1Q7Z2Z2 1120 aaKnown RBP17.83■□□□□ 0.44
VEGFA-222ENST00000520948 TAF8Q7Z7C8 310 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 LDB1Q86U70 411 aaPredicted RBP17.83■□□□□ 0.44
VEGFA-222ENST00000520948 UNC5BQ8IZJ1 945 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 LSMEM2Q8N112 164 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 LSM14AQ8ND56 463 aaKnown RBP17.83■□□□□ 0.44
VEGFA-222ENST00000520948 FBXO36Q8NEA4 188 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 NAT14Q8WUY8 206 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 KCNE4Q8WWG9 221 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.83■□□□□ 0.447e-6■■■■■ 27.5
VEGFA-222ENST00000520948 DCUN1D1Q96GG9 259 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 TCF12Q99081 682 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 TIMM29Q9BSF4 260 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 ASCL3Q9NQ33 180 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 SPATS2LQ9NUQ6 558 aaKnown RBP17.83■□□□□ 0.44
VEGFA-222ENST00000520948 GULP1Q9UBP9 304 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 ZC3H7BQ9UGR2 993 aaKnown RBP17.83■□□□□ 0.44
VEGFA-222ENST00000520948 SATB2Q9UPW6 733 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 PRSS21Q9Y6M0 314 aa17.83■□□□□ 0.44
VEGFA-222ENST00000520948 HELZ2Q9BYK8 2649 aaKnown RBP17.82■□□□□ 0.44
VEGFA-222ENST00000520948 A0A1W2PNU3 283 aaPredicted RBP17.82■□□□□ 0.44
VEGFA-222ENST00000520948 OR2AG2A6NM03 316 aa17.82■□□□□ 0.44
VEGFA-222ENST00000520948 CFAP99D6REC4 459 aa17.82■□□□□ 0.44
VEGFA-222ENST00000520948 CASC3O15234 703 aaKnown RBP17.82■□□□□ 0.44
VEGFA-222ENST00000520948 KLK10O43240 276 aa17.82■□□□□ 0.44
VEGFA-222ENST00000520948 OR1I1O60431 355 aa17.82■□□□□ 0.44
VEGFA-222ENST00000520948 KCNJ13O60928 360 aa17.82■□□□□ 0.44
VEGFA-222ENST00000520948 POP7O75817 140 aaKnown RBP17.82■□□□□ 0.44
VEGFA-222ENST00000520948 DXOO77932 396 aaKnown RBP17.82■□□□□ 0.44
VEGFA-222ENST00000520948 AP2A2O94973 939 aa17.82■□□□□ 0.44
VEGFA-222ENST00000520948 OGNP20774 298 aaKnown RBP17.82■□□□□ 0.44
VEGFA-222ENST00000520948 PPARGP37231 505 aaPredicted RBP17.82■□□□□ 0.44
VEGFA-222ENST00000520948 TTPAP49638 278 aa17.82■□□□□ 0.44
VEGFA-222ENST00000520948 PRLHRP49683 370 aa17.82■□□□□ 0.44
VEGFA-222ENST00000520948 CFHR1Q03591 330 aa17.82■□□□□ 0.44
VEGFA-222ENST00000520948 DMPKQ09013 629 aa17.82■□□□□ 0.44
VEGFA-222ENST00000520948 ISXQ2M1V0 245 aa17.82■□□□□ 0.44
VEGFA-222ENST00000520948 ZNF658BQ4V348 819 aaPredicted RBP17.82■□□□□ 0.44
VEGFA-222ENST00000520948 AARS2Q5JTZ9 985 aaKnown RBP17.82■□□□□ 0.44
VEGFA-222ENST00000520948 C6orf132Q5T0Z8 1188 aa17.82■□□□□ 0.44
VEGFA-222ENST00000520948 CRTC3Q6UUV7 619 aa17.82■□□□□ 0.44
VEGFA-222ENST00000520948 XKR5Q6UX68 686 aa17.82■□□□□ 0.44
VEGFA-222ENST00000520948 ZNF605Q86T29 641 aa17.82■□□□□ 0.44
VEGFA-222ENST00000520948 ANKMY2Q8IV38 441 aa17.82■□□□□ 0.44
VEGFA-222ENST00000520948 LMNTD2Q8IXW0 634 aa17.82■□□□□ 0.44
VEGFA-222ENST00000520948 ZBED8Q8IZ13 594 aa17.82■□□□□ 0.44
VEGFA-222ENST00000520948 CLDN19Q8N6F1 224 aa17.82■□□□□ 0.44
VEGFA-222ENST00000520948 SCG3Q8WXD2 468 aaKnown RBP17.82■□□□□ 0.44
VEGFA-222ENST00000520948 ATXN7L3BQ96GX2 97 aa17.82■□□□□ 0.44
VEGFA-222ENST00000520948 TTC1Q99614 292 aa17.82■□□□□ 0.44
VEGFA-222ENST00000520948 P2RY12Q9H244 342 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms