RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 LIPJQ5W064 366 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 ESRP1Q6NXG1 681 aaKnown RBP4.89□□□□□ -1.63
PTPN13-209ENST00000511467 QSOX2Q6ZRP7 698 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 TTLL10Q6ZVT0 673 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 MARK2Q7KZI7 788 aaKnown RBP4.89□□□□□ -1.63
PTPN13-209ENST00000511467 MON1BQ7L1V2 547 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 ZNF550Q7Z398 422 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 GSPT2Q8IYD1 628 aaKnown RBP4.89□□□□□ -1.63
PTPN13-209ENST00000511467 CCDC107Q8WV48 283 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 C1orf54Q8WWF1 131 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 ASB13Q8WXK3 278 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 AP2M1Q96CW1 435 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 HERPUD2Q9BSE4 406 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 PAK6Q9NQU5 681 aaPredicted RBP4.89□□□□□ -1.63
PTPN13-209ENST00000511467 ZNF624Q9P2J8 865 aaPredicted RBP4.89□□□□□ -1.63
PTPN13-209ENST00000511467 ANKMY1Q9P2S6 941 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 GNEQ9Y223 722 aaKnown RBP4.89□□□□□ -1.63
PTPN13-209ENST00000511467 TRIM17Q9Y577 477 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 TMEM14AQ9Y6G1 99 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 B2RBV5 119 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 ZNF879B4DU55 563 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 C9IYK1 514 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 PDLIM1O00151 329 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 SUV39H1O43463 412 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 MTRF1O75570 445 aaKnown RBP4.89□□□□□ -1.63
PTPN13-209ENST00000511467 SLC22A3O75751 556 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 OAS1P00973 400 aaKnown RBP4.89□□□□□ -1.63
PTPN13-209ENST00000511467 EFNA1P20827 205 aaPredicted RBP4.89□□□□□ -1.63
PTPN13-209ENST00000511467 GLRA2P23416 452 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 LCN1P31025 176 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 ADRA1BP35368 520 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 MAP2K4P45985 399 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 HTR3AP46098 478 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 ORC1Q13415 861 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 RBM48Q5RL73 367 aaKnown RBP4.89□□□□□ -1.63
PTPN13-209ENST00000511467 CPTPQ5TA50 214 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 MEDAGQ5VYS4 303 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 MICU2Q8IYU8 434 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 MDM1Q8TC05 714 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 SLC2A14Q8TDB8 520 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 FAM210AQ96ND0 272 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 CHP1Q99653 195 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 SLC4A5Q9BY07 1137 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 MAGIXQ9H6Y5 334 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 IFT52Q9Y366 437 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 LCHNA4D1U4 455 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 TBC1D3BA6NDS4 549 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 FAM86B1E9PN63 330 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 ZMYND10O75800 440 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 FAM86B2P0C5J1 330 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 CCDC159P0C7I6 412 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 CYP2B6P20813 491 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 AGXTP21549 392 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 GPR1P46091 355 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 ZYG11AQ6WRX3 759 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 ARID3BQ8IVW6 561 aaPredicted RBP4.89□□□□□ -1.63
PTPN13-209ENST00000511467 FBXO16Q8IX29 292 aaPredicted RBP4.89□□□□□ -1.63
PTPN13-209ENST00000511467 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.89□□□□□ -1.63
PTPN13-209ENST00000511467 GALNT15Q8N3T1 639 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 CCDC54Q8NEL0 328 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 GATAD2BQ8WXI9 593 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 BAP1Q92560 729 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 BCO2Q9BYV7 579 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 RNF208Q9H0X6 261 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 TDP1Q9NUW8 608 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 DMAC2Q9NW81 257 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 ENTPD2Q9Y5L3 495 aa4.89□□□□□ -1.63
PTPN13-209ENST00000511467 A0A096LPI6 279 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 INSIG1O15503 277 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 UNC5CO95185 931 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 KCNA3P22001 575 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 GRK5P34947 590 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 MNDAP41218 407 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 CCT3P49368 545 aaKnown RBP4.88□□□□□ -1.63
PTPN13-209ENST00000511467 CLCN4P51793 760 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 ADGRD1Q6QNK2 874 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 CES3Q6UWW8 571 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 TMCO2Q7Z6W1 182 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-209ENST00000511467 FSTL5Q8N475 847 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-209ENST00000511467 PNLDC1Q8NA58 520 aaKnown RBP4.88□□□□□ -1.63
PTPN13-209ENST00000511467 TTC16Q8NEE8 873 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 RGMAQ96B86 450 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 RNFT2Q96EX2 444 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 AGAP3Q96P47 875 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 PRDM9Q9NQV7 894 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 DNAJC11Q9NVH1 559 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.88□□□□□ -1.63
PTPN13-209ENST00000511467 SRRDQ9UH36 339 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 FBXW11Q9UKB1 542 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 FBXO5Q9UKT4 447 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 E2F8A0AVK6 867 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 FAM221BA6H8Z2 402 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 FADS2P1A8MWK0 482 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 ARVCFO00192 962 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 EML1O00423 815 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 SERPINA1P01009 418 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 PRKAR1AP10644 381 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 ANXA8P13928 327 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 CD9P21926 228 aa4.88□□□□□ -1.63
PTPN13-209ENST00000511467 SCTRP47872 440 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms