RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 IFNAR1P17181 557 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 S1PR1P21453 382 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 MCM3P25205 808 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 BSGP35613 385 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 PSMC4P43686 418 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 ASMTP46597 345 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 ATP5OP48047 213 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 SULT1E1P49888 294 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 GPC3P51654 580 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 PPP5CP53041 499 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 DLX5P56178 289 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 CSNK2A1P68400 391 aaPredicted RBP3.1□□□□□ -1.91
RBM28-207ENST00000488249 CREB5Q02930 508 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 FRG1Q14331 258 aaKnown RBP3.1□□□□□ -1.91
RBM28-207ENST00000488249 ZRSR1Q15695 479 aaKnown RBP3.1□□□□□ -1.91
RBM28-207ENST00000488249 ADIPOQQ15848 244 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 TMEM266Q2M3C6 531 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 DPCR1Q3MIW9 517 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 KCNT1Q5JUK3 1230 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 DUS1LQ6P1R4 473 aaKnown RBP3.1□□□□□ -1.91
RBM28-207ENST00000488249 CTR9Q6PD62 1173 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 C11orf88Q6PI97 169 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 TMTC3Q6ZXV5 915 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 CUZD1Q86UP6 607 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 ODF3L1Q8IXM7 274 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 RPAP2Q8IXW5 612 aaPredicted RBP3.1□□□□□ -1.91
RBM28-207ENST00000488249 ZNF34Q8IZ26 560 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 KCNH5Q8NCM2 988 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 CSNK2A3Q8NEV1 391 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 OR2AK2Q8NG84 335 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 CTCFLQ8NI51 663 aaPredicted RBP3.1□□□□□ -1.91
RBM28-207ENST00000488249 LNX1Q8TBB1 728 aaPredicted RBP3.1□□□□□ -1.91
RBM28-207ENST00000488249 ETNPPLQ8TBG4 499 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 KCNG4Q8TDN1 519 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 SECTM1Q8WVN6 248 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 C17orf50Q8WW18 174 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 SEPT1Q8WYJ6 367 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 SHC3Q92529 594 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 IGSF8Q969P0 613 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 EXOC4Q96A65 974 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 FAM149B1Q96BN6 582 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 MMABQ96EY8 250 aaPredicted RBP3.1□□□□□ -1.91
RBM28-207ENST00000488249 HARBI1Q96MB7 349 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 RBM14Q96PK6 669 aaKnown RBP3.1□□□□□ -1.91
RBM28-207ENST00000488249 CRACR2AQ9BSW2 395 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 NCOR1P1Q9H4R4 102 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 EVA1AQ9H8M9 152 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 ADPRHL2Q9NX46 363 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 DONSONQ9NYP3 566 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 COQ3Q9NZJ6 369 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 DLGAP2Q9P1A6 1054 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 CLIP2Q9UDT6 1046 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 PTBP2Q9UKA9 531 aaKnown RBP3.1□□□□□ -1.91
RBM28-207ENST00000488249 NOSIPQ9Y314 301 aaKnown RBP3.1□□□□□ -1.91
RBM28-207ENST00000488249 KIF3AQ9Y496 699 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 LOXL2Q9Y4K0 774 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 PCDHAC2Q9Y5I4 1007 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 AP1M2Q9Y6Q5 423 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 CGNL1Q0VF96 1302 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 AKNAQ7Z591 1439 aa3.1□□□□□ -1.91
RBM28-207ENST00000488249 ARPC4-TTLL3A0A0A6YYG9 625 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 CCDC169A6NNP5 214 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 AGAP14A8MT82 685 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 KIF2AO00139 706 aaPredicted RBP3.09□□□□□ -1.91
RBM28-207ENST00000488249 SYNCRIPO60506 623 aaKnown RBP3.09□□□□□ -1.91
RBM28-207ENST00000488249 TSC22D2O75157 780 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 TBX10O75333 385 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 NKX2-2O95096 273 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 EGFP01133 1207 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 CLEC3BP05452 202 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 HEXBP07686 556 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 CSH1P0DML2 217 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 CSH2P0DML3 217 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 HSPA1AP0DMV8 641 aaKnown RBP3.09□□□□□ -1.91
RBM28-207ENST00000488249 HSPA1BP0DMV9 641 aaKnown RBP3.09□□□□□ -1.91
RBM28-207ENST00000488249 ACADMP11310 421 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 TMEM11P17152 192 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 CD9P21926 228 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 DGKAP23743 735 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 TLX1P31314 330 aaPredicted RBP3.09□□□□□ -1.91
RBM28-207ENST00000488249 NNMTP40261 264 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 PBX3P40426 434 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 TMPOP42166 694 aaKnown RBP3.09□□□□□ -1.91
RBM28-207ENST00000488249 MATR3P43243 847 aaKnown RBP eCLIP3.09□□□□□ -1.91
RBM28-207ENST00000488249 SLC12A3P55017 1021 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 F2RL1P55085 397 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 CCNA1P78396 465 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 MC1RQ01726 317 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 RELQ04864 619 aaPredicted RBP3.09□□□□□ -1.91
RBM28-207ENST00000488249 FOXM1Q08050 763 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 TROAPQ12815 778 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 GRIK2Q13002 908 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 CHAF1BQ13112 559 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 NFE2L1Q14494 772 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 PPP1R7Q15435 360 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 TBCEQ15813 527 aaPredicted RBP3.09□□□□□ -1.91
RBM28-207ENST00000488249 KBTBD12Q3ZCT8 623 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 KRBOX4Q5JUW0 171 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 FRG2Q64ET8 278 aa3.09□□□□□ -1.91
RBM28-207ENST00000488249 OLFM4Q6UX06 510 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms