RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 OR6J1Q8NGC5 347 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 OR6P1Q8NGX9 317 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 OR6F1Q8NGZ6 308 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.85□□□□□ -1.15
TPM3-215ENST00000469717 YIPF6Q96EC8 236 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 UBXN10Q96LJ8 280 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 TRIM54Q9BYV2 358 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 SIK2Q9H0K1 926 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 DCSTAMPQ9H295 470 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 CPNE5Q9HCH3 593 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 NDFIP2Q9NV92 336 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 PAQR5Q9NXK6 330 aaPredicted RBP7.85□□□□□ -1.15
TPM3-215ENST00000469717 SNTG2Q9NY99 539 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 LIMD1Q9UGP4 676 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 TSR3Q9UJK0 312 aaKnown RBP7.85□□□□□ -1.15
TPM3-215ENST00000469717 IKZF3Q9UKT9 509 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 TTC3P53804 2025 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 LCTP09848 1927 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 A0A087X1B8 175 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 YJEFN3A6XGL0 299 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 CYP7B1O75881 506 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 KRT8P05787 483 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 CD36P16671 472 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 GRK5P34947 590 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 RCAN2Q14206 197 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 UGP2Q16851 508 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 AASDHQ4L235 1098 aaPredicted RBP7.85□□□□□ -1.15
TPM3-215ENST00000469717 PRMT9Q6P2P2 845 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 CNTN4Q8IWV2 1026 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 TTC39CQ8N584 583 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 ASCC1Q8N9N2 400 aaKnown RBP7.85□□□□□ -1.15
TPM3-215ENST00000469717 NPY6RQ99463 290 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 FBXL12Q9NXK8 326 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 ASB1Q9Y576 335 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 GON4LQ3T8J9 2241 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 SBF1O95248 1867 aa7.85□□□□□ -1.15
TPM3-215ENST00000469717 DFNA5O60443 496 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 DAB1O75553 588 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 PRKD3O94806 890 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 CYBBP04839 570 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 LIPAP38571 399 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 MAXP61244 160 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 FKBP1AP62942 108 aaKnown RBP7.84□□□□□ -1.15
TPM3-215ENST00000469717 HERVK_113P63132 956 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 POU4F1Q01851 419 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 TNFAIP2Q03169 654 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 CHRNB3Q05901 458 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 SNX17Q15036 470 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 TTC23Q5W5X9 447 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 RAP1GAP2Q684P5 730 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 ZCCHC8Q6NZY4 707 aaKnown RBP7.84□□□□□ -1.15
TPM3-215ENST00000469717 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.84□□□□□ -1.15
TPM3-215ENST00000469717 C11orf74Q86VG3 221 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 MICU2Q8IYU8 434 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 C10orf111Q8N326 155 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 IL17RDQ8NFM7 739 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 PROX1Q92786 737 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 ERVK-6Q9BXR3 956 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 RIBC2Q9H4K1 309 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 CNGB3Q9NQW8 809 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 TRMT13Q9NUP7 481 aaKnown RBP7.84□□□□□ -1.15
TPM3-215ENST00000469717 ERVK13-1Q9NX77 482 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 TMEFF2Q9UIK5 374 aaPredicted RBP7.84□□□□□ -1.15
TPM3-215ENST00000469717 LOC100506127A0A0U1RQW1 187 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 EFCAB9A8MZ26 197 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 ARVCFO00192 962 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 TFECO14948 347 aaPredicted RBP7.84□□□□□ -1.15
TPM3-215ENST00000469717 SCO2O43819 266 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 RECQL5O94762 991 aaPredicted RBP7.84□□□□□ -1.15
TPM3-215ENST00000469717 ABCB1P08183 1280 aaPredicted RBP7.84□□□□□ -1.15
TPM3-215ENST00000469717 RBP1P09455 135 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 MTHFD2P13995 350 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 GPLD1P80108 840 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 CDC20Q12834 499 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 WDR45BQ5MNZ6 344 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 AHSA2Q719I0 299 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 GPRIN1Q7Z2K8 1008 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 GALNT10Q86SR1 603 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 PARP16Q8N5Y8 322 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 PHF10Q8WUB8 498 aaKnown RBP7.84□□□□□ -1.15
TPM3-215ENST00000469717 SEPT1Q8WYJ6 367 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 ZNF560Q96MR9 790 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 WDR6Q9NNW5 1121 aaKnown RBP7.84□□□□□ -1.15
TPM3-215ENST00000469717 DDIT4Q9NX09 232 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 KLK14Q9P0G3 267 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 BCKDKO14874 412 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 AOC2O75106 756 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 GJB3O75712 270 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 C1QCP02747 245 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 RAP2AP10114 183 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 ZNF37AP17032 561 aaPredicted RBP7.84□□□□□ -1.15
TPM3-215ENST00000469717 ACVR2AP27037 513 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 TGFBR2P37173 567 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 ATP4BP51164 291 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 POLR2JP52435 117 aaKnown RBP7.84□□□□□ -1.15
TPM3-215ENST00000469717 CRISP3P54108 245 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 GBX1Q14549 363 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 CRY1Q16526 586 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 GTDC1Q4AE62 458 aa7.84□□□□□ -1.15
TPM3-215ENST00000469717 SIGIRRQ6IA17 410 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms