RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 ZNF658BQ4V348 819 aaPredicted RBP30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 KIAA0408Q6ZU52 694 aa30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 LRRC6Q86X45 466 aa30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 SPNS2Q8IVW8 549 aa30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 UHMK1Q8TAS1 419 aaKnown RBP30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 PATE1Q8WXA2 126 aa30.04■■■□□ 2.4
CSNK1E-206ENST00000413574 GOLGA4Q13439 2230 aaKnown RBP30.03■■■□□ 2.4
CSNK1E-206ENST00000413574 QSOX1O00391 747 aa30.03■■■□□ 2.4
CSNK1E-206ENST00000413574 TPP1O14773 563 aa30.03■■■□□ 2.4
CSNK1E-206ENST00000413574 FTH1P02794 183 aa30.03■■■□□ 2.4
CSNK1E-206ENST00000413574 ESR1P03372 595 aa30.03■■■□□ 2.4
CSNK1E-206ENST00000413574 PKMP14618 531 aaKnown RBP30.03■■■□□ 2.4
CSNK1E-206ENST00000413574 VCLP18206 1134 aa30.03■■■□□ 2.4
CSNK1E-206ENST00000413574 STX2P32856 288 aa30.03■■■□□ 2.4
CSNK1E-206ENST00000413574 PMS2P54278 862 aa30.03■■■□□ 2.4
CSNK1E-206ENST00000413574 DMPKQ09013 629 aa30.03■■■□□ 2.4
CSNK1E-206ENST00000413574 BRD3Q15059 726 aa30.03■■■□□ 2.4
CSNK1E-206ENST00000413574 C6orf132Q5T0Z8 1188 aa30.03■■■□□ 2.4
CSNK1E-206ENST00000413574 LVRNQ6Q4G3 990 aa30.03■■■□□ 2.4
CSNK1E-206ENST00000413574 STRA8Q7Z7C7 330 aa30.03■■■□□ 2.4
CSNK1E-206ENST00000413574 ELMO1Q92556 727 aa30.03■■■□□ 2.4
CSNK1E-206ENST00000413574 RABGEF1Q9UJ41 708 aa30.03■■■□□ 2.4
CSNK1E-206ENST00000413574 PCDHB1Q9Y5F3 818 aa30.03■■■□□ 2.4
CSNK1E-206ENST00000413574 TRBV23OR9-2A0A075B6M9 112 aa30.02■■■□□ 2.4
CSNK1E-206ENST00000413574 ALPPL2P10696 532 aa30.02■■■□□ 2.4
CSNK1E-206ENST00000413574 CLCNKAP51800 687 aa30.02■■■□□ 2.4
CSNK1E-206ENST00000413574 CTAGE3PQ8IX95 158 aa30.02■■■□□ 2.4
CSNK1E-206ENST00000413574 ZDHHC1Q8WTX9 485 aa30.02■■■□□ 2.4
CSNK1E-206ENST00000413574 ATXN7L3BQ96GX2 97 aa30.02■■■□□ 2.4
CSNK1E-206ENST00000413574 NDNQ99608 321 aa30.02■■■□□ 2.4
CSNK1E-206ENST00000413574 GALPQ9UBC7 116 aa30.02■■■□□ 2.4
CSNK1E-206ENST00000413574 PCOLCE2Q9UKZ9 415 aa30.02■■■□□ 2.4
CSNK1E-206ENST00000413574 PSMD13Q9UNM6 376 aa30.02■■■□□ 2.4
CSNK1E-206ENST00000413574 CCR7P32248 378 aa30.01■■■□□ 2.39
CSNK1E-206ENST00000413574 CSE1LP55060 971 aaKnown RBP30.01■■■□□ 2.39
CSNK1E-206ENST00000413574 METRNLQ641Q3 311 aa30.01■■■□□ 2.39
CSNK1E-206ENST00000413574 ZNF449Q6P9G9 518 aa30.01■■■□□ 2.39
CSNK1E-206ENST00000413574 HM13Q8TCT9 377 aa30.01■■■□□ 2.39
CSNK1E-206ENST00000413574 CDKL2Q92772 493 aa30.01■■■□□ 2.39
CSNK1E-206ENST00000413574 DUSP23Q9BVJ7 150 aa30.01■■■□□ 2.39
CSNK1E-206ENST00000413574 SCHIP1Q9P0W5 487 aaPredicted RBP30.01■■■□□ 2.39
CSNK1E-206ENST00000413574 WDR37Q9Y2I8 494 aa30.01■■■□□ 2.39
CSNK1E-206ENST00000413574 C17orf113A0A1B0GUU1 675 aa30■■■□□ 2.39
CSNK1E-206ENST00000413574 IDSP22304 550 aa30■■■□□ 2.39
CSNK1E-206ENST00000413574 PHBP35232 272 aa30■■■□□ 2.39
CSNK1E-206ENST00000413574 CD151P48509 253 aa30■■■□□ 2.39
CSNK1E-206ENST00000413574 BOP1Q14137 746 aaKnown RBP30■■■□□ 2.39
CSNK1E-206ENST00000413574 INAVAQ3KP66 663 aa30■■■□□ 2.39
CSNK1E-206ENST00000413574 RBM20Q5T481 1227 aaKnown RBP30■■■□□ 2.39
CSNK1E-206ENST00000413574 PIP4P1Q86T03 277 aa30■■■□□ 2.39
CSNK1E-206ENST00000413574 SLC26A11Q86WA9 606 aa30■■■□□ 2.39
CSNK1E-206ENST00000413574 SLC35F3Q8IY50 421 aa30■■■□□ 2.39
CSNK1E-206ENST00000413574 NAGSQ8N159 534 aa30■■■□□ 2.39
CSNK1E-206ENST00000413574 PPM1NQ8N819 430 aa30■■■□□ 2.39
CSNK1E-206ENST00000413574 APOLD1Q96LR9 279 aa30■■■□□ 2.39
CSNK1E-206ENST00000413574 COG4Q9H9E3 785 aa30■■■□□ 2.39
CSNK1E-206ENST00000413574 A6NCN8 305 aa30■■■□□ 2.39
CSNK1E-206ENST00000413574 PDZK1P1A8MUH7 402 aa30■■■□□ 2.39
CSNK1E-206ENST00000413574 NOBOXO60393 691 aa30■■■□□ 2.39
CSNK1E-206ENST00000413574 KCNJ13O60928 360 aa30■■■□□ 2.39
CSNK1E-206ENST00000413574 CBFA2T3O75081 653 aa30■■■□□ 2.39
CSNK1E-206ENST00000413574 BRAFP15056 766 aa30■■■□□ 2.39
CSNK1E-206ENST00000413574 PREPP48147 710 aa30■■■□□ 2.39
CSNK1E-206ENST00000413574 ZCCHC8Q6NZY4 707 aaKnown RBP30■■■□□ 2.39
CSNK1E-206ENST00000413574 TRMT10CQ7L0Y3 403 aaKnown RBP30■■■□□ 2.39
CSNK1E-206ENST00000413574 GALNT7Q86SF2 657 aa30■■■□□ 2.39
CSNK1E-206ENST00000413574 KYQ8NBH2 561 aa30■■■□□ 2.39
CSNK1E-206ENST00000413574 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP30■■■□□ 2.39
CSNK1E-206ENST00000413574 MRRFQ96E11 262 aaKnown RBP30■■■□□ 2.39
CSNK1E-206ENST00000413574 CCDC68Q9H2F9 335 aa30■■■□□ 2.39
CSNK1E-206ENST00000413574 SARS2Q9NP81 518 aaKnown RBP30■■■□□ 2.39
CSNK1E-206ENST00000413574 MED16Q9Y2X0 877 aa30■■■□□ 2.39
CSNK1E-206ENST00000413574 COL5A1P20908 1838 aaPredicted RBP29.99■■■□□ 2.39
CSNK1E-206ENST00000413574 TM4SF5O14894 197 aa29.99■■■□□ 2.39
CSNK1E-206ENST00000413574 FAM155BO75949 473 aa29.99■■■□□ 2.39
CSNK1E-206ENST00000413574 CHRM3P20309 590 aa29.99■■■□□ 2.39
CSNK1E-206ENST00000413574 PDHA2P29803 388 aa29.99■■■□□ 2.39
CSNK1E-206ENST00000413574 RSPO4Q2I0M5 234 aaPredicted RBP29.99■■■□□ 2.39
CSNK1E-206ENST00000413574 AARSD1Q9BTE6 412 aaKnown RBP29.99■■■□□ 2.39
CSNK1E-206ENST00000413574 CDV3Q9UKY7 258 aaKnown RBP29.99■■■□□ 2.39
CSNK1E-206ENST00000413574 LY6G6EA0A0G2JKS1 128 aa29.98■■■□□ 2.39
CSNK1E-206ENST00000413574 F8W8V4 182 aa29.98■■■□□ 2.39
CSNK1E-206ENST00000413574 RIPK2O43353 540 aa29.98■■■□□ 2.39
CSNK1E-206ENST00000413574 OGFOD3Q6PK18 319 aa29.98■■■□□ 2.39
CSNK1E-206ENST00000413574 ACVR1CQ8NER5 493 aa29.98■■■□□ 2.39
CSNK1E-206ENST00000413574 DEFB124Q8NES8 71 aa29.98■■■□□ 2.39
CSNK1E-206ENST00000413574 SPDYE1Q8NFV5 336 aaPredicted RBP29.98■■■□□ 2.39
CSNK1E-206ENST00000413574 BAHD1Q8TBE0 780 aaPredicted RBP29.98■■■□□ 2.39
CSNK1E-206ENST00000413574 PANX3Q96QZ0 392 aa29.98■■■□□ 2.39
CSNK1E-206ENST00000413574 TSSK1BQ9BXA7 367 aa29.98■■■□□ 2.39
CSNK1E-206ENST00000413574 EPB41L4BQ9H329 900 aa29.98■■■□□ 2.39
CSNK1E-206ENST00000413574 ACSS3Q9H6R3 686 aa29.98■■■□□ 2.39
CSNK1E-206ENST00000413574 NSMCE4AQ9NXX6 385 aa29.98■■■□□ 2.39
CSNK1E-206ENST00000413574 U3KQA8 63 aa29.98■■■□□ 2.39
CSNK1E-206ENST00000413574 SLC30A4O14863 429 aa29.97■■■□□ 2.39
CSNK1E-206ENST00000413574 F3P13726 295 aa29.97■■■□□ 2.39
CSNK1E-206ENST00000413574 AOAHP28039 575 aa29.97■■■□□ 2.39
CSNK1E-206ENST00000413574 MAZP56270 477 aaKnown RBP29.97■■■□□ 2.39
CSNK1E-206ENST00000413574 CLCA4Q14CN2 919 aa29.97■■■□□ 2.39
CSNK1E-206ENST00000413574 PROX2Q3B8N5 592 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms