RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 KCNN2Q9H2S1 579 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 PRDM12Q9H4Q4 367 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 SDR39U1Q9NRG7 319 aaPredicted RBP12.64□□□□□ -0.39
HERC3-203ENST00000407637 SCN3BQ9NY72 215 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 EIF3KQ9UBQ5 218 aaKnown RBP12.64□□□□□ -0.39
HERC3-203ENST00000407637 DNAJB9Q9UBS3 223 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 FAM198AQ9UFP1 575 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 MAGEL2Q9UJ55 1249 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 RNF6Q9Y252 685 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 DNAJC15Q9Y5T4 150 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 ANK1P16157 1881 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 DICER1Q9UPY3 1922 aaKnown RBP12.64□□□□□ -0.39
HERC3-203ENST00000407637 MATN4O95460 622 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 HGFP14210 728 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 GRK5P34947 590 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 HNF4AP41235 474 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 SLC12A2P55011 1212 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 FOXA1P55317 472 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 NKX3-2P78367 333 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 SIM2Q14190 667 aaPredicted RBP12.63□□□□□ -0.39
HERC3-203ENST00000407637 MYLKQ15746 1914 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 ZNF667Q5HYK9 610 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 ARMC4Q5T2S8 1044 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 ARHGAP36Q6ZRI8 547 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 PHYKPLQ8IUZ5 450 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 SCUBE3Q8IX30 993 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 TUBGCP3Q96CW5 907 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 CDHR5Q9HBB8 845 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 NDFIP2Q9NV92 336 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 TMEFF2Q9UIK5 374 aaPredicted RBP12.63□□□□□ -0.39
HERC3-203ENST00000407637 BTRCQ9Y297 605 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 PEX16Q9Y5Y5 336 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 USP3Q9Y6I4 520 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 A3GALT2U3KPV4 340 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 U3KQV3 271 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 PPP6CO00743 305 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 PDGFAP04085 211 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 CYBBP04839 570 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 ANXA6P08133 673 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 MSH3P20585 1137 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 GLUD2P49448 558 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 KCNK10P57789 538 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 MTPNP58546 118 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 OSTNP61366 133 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 MVKQ03426 396 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 MGAT3Q09327 533 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 COQ5Q5HYK3 327 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 ZNF767PQ75MW2 155 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 UBASH3BQ8TF42 649 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 TWIST2Q8WVJ9 160 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 KHSRPQ92945 711 aaKnown RBP eCLIP12.63□□□□□ -0.398e-11■■■■■ 33.2
HERC3-203ENST00000407637 KCNA7Q96RP8 456 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 APOL4Q9BPW4 351 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 CCDC32Q9BV29 185 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 B3GNT5Q9BYG0 378 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 ZNF556Q9HAH1 456 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 CCDC59Q9P031 241 aaKnown RBP12.63□□□□□ -0.39
HERC3-203ENST00000407637 LYVE1Q9Y5Y7 322 aa12.63□□□□□ -0.39
HERC3-203ENST00000407637 PNMA8CA0A1B0GUJ8 204 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 E5RI56 91 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 TSPAN4O14817 238 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 SLC16A6O15403 523 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 PLA2G6O60733 806 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 RECQL5O94762 991 aaPredicted RBP12.62□□□□□ -0.39
HERC3-203ENST00000407637 HOXC6P09630 235 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 ERP29P30040 261 aaKnown RBP12.62□□□□□ -0.39
HERC3-203ENST00000407637 CA5AP35218 305 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 CTSKP43235 329 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 KPNA2P52292 529 aaKnown RBP12.62□□□□□ -0.39
HERC3-203ENST00000407637 B2MP61769 119 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 CCNJQ5T5M9 372 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 AHSA2Q719I0 299 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 CCDC190Q86UF4 302 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 TRIM48Q8IWZ4 208 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 LHFPL5Q8TAF8 219 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 PDLIM5Q96HC4 596 aaKnown RBP12.62□□□□□ -0.39
HERC3-203ENST00000407637 TAAR1Q96RJ0 339 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 MLPHQ9BV36 600 aaPredicted RBP12.62□□□□□ -0.39
HERC3-203ENST00000407637 BCO2Q9BYV7 579 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 RIBC2Q9H4K1 309 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 LIN7BQ9HAP6 207 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 COMMD8Q9NX08 183 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 NSMCE4AQ9NXX6 385 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 UBP1Q9NZI7 540 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 TSPAN16Q9UKR8 245 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 KCNJ13O60928 360 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 CILPO75339 1184 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 PFKLP17858 780 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 ARL4AP40617 200 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 SOX9P48436 509 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 GBX1Q14549 363 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 MXD4Q14582 209 aaPredicted RBP12.62□□□□□ -0.39
HERC3-203ENST00000407637 FSCN1Q16658 493 aaKnown RBP12.62□□□□□ -0.39
HERC3-203ENST00000407637 SVOPLQ8N434 492 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 YIPF7Q8N8F6 280 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 GIMAP1Q8WWP7 306 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 HDHD5Q9BXW7 423 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 UGT2B28Q9BY64 529 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 LRRC3Q9BY71 257 aa12.62□□□□□ -0.39
HERC3-203ENST00000407637 PTPRHQ9HD43 1115 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms