RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 ABCB7O75027 752 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 CR2P20023 1033 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 MSH3P20585 1137 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 PTGER3P43115 390 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 HK3P52790 923 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 MBTPS1Q14703 1052 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 PLCL1Q15111 1095 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 TGFBIQ15582 683 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 DUS1LQ6P1R4 473 aaKnown RBP17.7■□□□□ 0.42
PHF1-201ENST00000374512 STK40Q8N2I9 435 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 DTWD1Q8N5C7 304 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 EEF1AKMT1Q8WVE0 214 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 HDAC2Q92769 488 aaKnown RBP17.7■□□□□ 0.42
PHF1-201ENST00000374512 SDCCAG3Q96C92 435 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 SPATA17Q96L03 361 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 SEPT5Q99719 369 aaPredicted RBP17.7■□□□□ 0.42
PHF1-201ENST00000374512 TDRD1Q9BXT4 1180 aaKnown RBP17.7■□□□□ 0.42
PHF1-201ENST00000374512 PAIP1Q9H074 479 aaKnown RBP17.7■□□□□ 0.42
PHF1-201ENST00000374512 GPN2Q9H9Y4 310 aaPredicted RBP17.7■□□□□ 0.42
PHF1-201ENST00000374512 TLR9Q9NR96 1032 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 EIF2B4Q9UI10 523 aaKnown RBP17.7■□□□□ 0.42
PHF1-201ENST00000374512 ZNF510Q9Y2H8 683 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 SLC27A5Q9Y2P5 690 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 MTMR11A4FU01 709 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 H7C0S8 307 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 KDELR3O43731 214 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 C21orf59P57076 290 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 ERVPABLB-1P60509 514 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 NFATC3Q12968 1075 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 SPIDRQ14159 915 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 NEDD8Q15843 81 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 FGD3Q5JSP0 725 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 CYP20A1Q6UW02 462 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 ZDHHC13Q8IUH4 622 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 FAM126BQ8IXS8 530 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 LGI2Q8N0V4 545 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 CARNMT1Q8N4J0 409 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 SIDT2Q8NBJ9 832 aaKnown RBP17.7■□□□□ 0.42
PHF1-201ENST00000374512 DDHD1Q8NEL9 900 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 METTL6Q8TCB7 284 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 TMBIM1Q969X1 311 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 MYEOVQ96EZ4 313 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 CDK5RAP1Q96SZ6 601 aaKnown RBP17.7■□□□□ 0.42
PHF1-201ENST00000374512 ADGRE3Q9BY15 652 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 SMPD4Q9NXE4 827 aa17.7■□□□□ 0.42
PHF1-201ENST00000374512 DNAJB5O75953 348 aa17.69■□□□□ 0.42
PHF1-201ENST00000374512 EEF1B2P24534 225 aaKnown RBP17.69■□□□□ 0.42
PHF1-201ENST00000374512 CDH4P55283 916 aa17.69■□□□□ 0.42
PHF1-201ENST00000374512 SKIV2LQ15477 1246 aaKnown RBP17.69■□□□□ 0.42
PHF1-201ENST00000374512 FBXO48Q5FWF7 155 aa17.69■□□□□ 0.42
PHF1-201ENST00000374512 CTSL3PQ5NE16 218 aa17.69■□□□□ 0.42
PHF1-201ENST00000374512 OTUD3Q5T2D3 398 aaPredicted RBP17.69■□□□□ 0.42
PHF1-201ENST00000374512 ANKRD26P1Q6NSI1 321 aa17.69■□□□□ 0.42
PHF1-201ENST00000374512 SCIMPQ6UWF3 145 aa17.69■□□□□ 0.42
PHF1-201ENST00000374512 RNF165Q6ZSG1 346 aa17.69■□□□□ 0.42
PHF1-201ENST00000374512 C8orf59Q8N0T1 100 aaPredicted RBP17.69■□□□□ 0.42
PHF1-201ENST00000374512 CLEC4FQ8N1N0 589 aa17.69■□□□□ 0.42
PHF1-201ENST00000374512 SVOPLQ8N434 492 aa17.69■□□□□ 0.42
PHF1-201ENST00000374512 GIPC3Q8TF64 312 aa17.69■□□□□ 0.42
PHF1-201ENST00000374512 COX4I2Q96KJ9 171 aa17.69■□□□□ 0.42
PHF1-201ENST00000374512 PPP3R2Q96LZ3 170 aa17.69■□□□□ 0.42
PHF1-201ENST00000374512 SCUBE2Q9NQ36 999 aa17.69■□□□□ 0.42
PHF1-201ENST00000374512 DNAJB9Q9UBS3 223 aa17.69■□□□□ 0.42
PHF1-201ENST00000374512 BLOC1S6Q9UL45 172 aa17.69■□□□□ 0.42
PHF1-201ENST00000374512 A0A0D9SEW6 157 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 E5RI56 91 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 ANKRD28O15084 1053 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 LSM1O15116 133 aaKnown RBP17.68■□□□□ 0.42
PHF1-201ENST00000374512 TLR5O60602 858 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 NIPSNAP2O75323 286 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 KCNH1O95259 989 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 PRLP01236 227 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 ZDHHC11BP0C7U3 371 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 MAP4P27816 1152 aaKnown RBP17.68■□□□□ 0.42
PHF1-201ENST00000374512 GSTM2P28161 218 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 MC4RP32245 332 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 OXCT1P55809 520 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 GABARAPL2P60520 117 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 PYCR3Q53H96 274 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 TMEM214Q6NUQ4 689 aaKnown RBP17.68■□□□□ 0.42
PHF1-201ENST00000374512 ADAMTSL2Q86TH1 951 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 ACDQ96AP0 544 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 PLEKHA8Q96JA3 519 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 RPL10LQ96L21 214 aaKnown RBP17.68■□□□□ 0.42
PHF1-201ENST00000374512 SH3GL1Q99961 368 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 GPR62Q9BZJ7 368 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 CCSER2Q9H7U1 834 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 USE1Q9NZ43 259 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 MAGEB3O15480 346 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 OTCP00480 354 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 CAPN1P07384 714 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 MAD2L1Q13257 205 aaPredicted RBP17.68■□□□□ 0.42
PHF1-201ENST00000374512 GPR17Q13304 367 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 TOP3AQ13472 1001 aaPredicted RBP17.68■□□□□ 0.42
PHF1-201ENST00000374512 PSAPL1Q6NUJ1 521 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 LETMD1Q6P1Q0 360 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 IL27RAQ6UWB1 636 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 RALGPS2Q86X27 583 aaPredicted RBP17.68■□□□□ 0.42
PHF1-201ENST00000374512 PIANPQ8IYJ0 282 aa17.68■□□□□ 0.42
PHF1-201ENST00000374512 ABI1Q8IZP0 508 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms