RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 A0A0U1RQF3 1178 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 K7EPI3 171 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 OR10H2O60403 315 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 KERAO60938 352 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 RAP2AP10114 183 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 TEAD4Q15561 434 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 SMYD1Q8NB12 490 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 OR13C4Q8NGS5 318 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 TOP1MTQ969P6 601 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 RERGQ96A58 199 aaPredicted RBP16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 ESAMQ96AP7 390 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 NSMCE3Q96MG7 304 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 FERD3LQ96RJ6 166 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 SMOC2Q9H3U7 446 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 SIRPGQ9P1W8 387 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 SNPHO15079 494 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 UGT2B17O75795 530 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 IFNW1P05000 195 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 ITGAXP20702 1163 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 IL12AP29459 219 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 LAPTM5Q13571 262 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 GCNT6Q5T4J0 391 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 GALNT5Q7Z7M9 940 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 LIX1Q8N485 282 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 TNKS2Q9H2K2 1166 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 FCF1Q9Y324 198 aaKnown RBP16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 UNCXA6NJT0 531 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 ZW10O43264 779 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 WBP4O75554 376 aaKnown RBP16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 TAS1R3Q7RTX0 852 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 FIZ1Q96SL8 496 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 SEZ6LQ9BYH1 1024 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 IGFLR1Q9H665 355 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 POLR1DQ9Y2S0 133 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 SLC45A1Q9Y2W3 748 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 C10orf71Q711Q0 1435 aa16.88■□□□□ 0.29
TRAPPC11-201ENST00000334690 ILVBLA1L0T0 632 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 TNFRSF11BO00300 401 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 GNRH1P01148 92 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 COL6A1P12109 1028 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 AMD1P17707 334 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 XRCC1P18887 633 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 GNAZP19086 355 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 C9orf64Q5T6V5 341 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 ZZZ3Q8IYH5 903 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 PEBP4Q96S96 227 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 E7ESA3 106 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 CXCR6O00574 342 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 RPS24P62847 133 aaKnown RBP16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 ADGRF1Q5T601 910 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 SLC34A3Q8N130 599 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 ARL14EPQ8N8R7 260 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 BRI3BPQ8WY22 251 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 TMEM209Q96SK2 561 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 IMP3Q9NV31 184 aaKnown RBP16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 PDE10AQ9Y233 779 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 OR10H1Q9Y4A9 318 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 F2P00734 622 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 TMEM214Q6NUQ4 689 aaKnown RBP16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 SNX20Q7Z614 316 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 POMGNT2Q8NAT1 580 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 PIK3C3Q8NEB9 887 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 PCDHAC1Q9H158 963 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 ZNF395Q9H8N7 513 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 TXNRD2Q9NNW7 524 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 POLR3BQ9NW08 1133 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 DNAJB9Q9UBS3 223 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 ARL5AQ9Y689 179 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 OR2AG2A6NM03 316 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 IQCF5A8MTL0 148 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 HIST1H2ABP04908 130 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 PITRM1Q5JRX3 1037 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 C1orf220Q5T0J3 134 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 C15orf39Q6ZRI6 1047 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 FRMD7Q6ZUT3 714 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 CHST9Q7L1S5 443 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 HIST3H2AQ7L7L0 130 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 PACRGLQ8N7B6 248 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 HIST1H2ACQ93077 130 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 HEPHQ9BQS7 1158 aa16.87■□□□□ 0.29
TRAPPC11-201ENST00000334690 FADS2P1A8MWK0 482 aa16.86■□□□□ 0.29
TRAPPC11-201ENST00000334690 FFAR2O15552 330 aa16.86■□□□□ 0.29
TRAPPC11-201ENST00000334690 PTX3P26022 381 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC11-201ENST00000334690 TPP2P29144 1249 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC11-201ENST00000334690 NDUFAF6Q330K2 333 aa16.86■□□□□ 0.29
TRAPPC11-201ENST00000334690 PLEKHG4Q58EX7 1191 aa16.86■□□□□ 0.29
TRAPPC11-201ENST00000334690 NEK5Q6P3R8 708 aa16.86■□□□□ 0.29
TRAPPC11-201ENST00000334690 REM2Q8IYK8 340 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC11-201ENST00000334690 XAGE5Q8WWM1 108 aa16.86■□□□□ 0.29
TRAPPC11-201ENST00000334690 MCMBPQ9BTE3 642 aa16.86■□□□□ 0.29
TRAPPC11-201ENST00000334690 CCDC177Q9NQR7 707 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC11-201ENST00000334690 MAGEB17A8MXT2 336 aa16.86■□□□□ 0.29
TRAPPC11-201ENST00000334690 CCNDBP1O95273 360 aa16.86■□□□□ 0.29
TRAPPC11-201ENST00000334690 FADS2O95864 444 aaKnown RBP16.86■□□□□ 0.29
TRAPPC11-201ENST00000334690 NCK1P16333 377 aa16.86■□□□□ 0.29
TRAPPC11-201ENST00000334690 IKBIPQ70UQ0 350 aa16.86■□□□□ 0.29
TRAPPC11-201ENST00000334690 HID1Q8IV36 788 aa16.86■□□□□ 0.29
TRAPPC11-201ENST00000334690 AHI1Q8N157 1196 aa16.86■□□□□ 0.29
TRAPPC11-201ENST00000334690 NLGN2Q8NFZ4 835 aa16.86■□□□□ 0.29
TRAPPC11-201ENST00000334690 ANKRD49Q8WVL7 239 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms