RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 CLDN9O95484 217 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 GOT2P00505 430 aaKnown RBP16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 MSL3P1P0C860 447 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 LINGO4Q6UY18 593 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 TTC29Q8NA56 475 aaPredicted RBP16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 ISOC1Q96CN7 298 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 SLC25A51Q9H1U9 297 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 MED28Q9H204 178 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 EQTNQ9NQ60 294 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 TESMINQ9Y4I5 508 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 PCDHGC4Q9Y5F7 938 aa16.28■□□□□ 0.2
SH3RF1-201ENST00000284637 ARHGEF33A8MVX0 844 aa16.27■□□□□ 0.2
SH3RF1-201ENST00000284637 ISM1B1AKI9 464 aa16.27■□□□□ 0.2
SH3RF1-201ENST00000284637 OR10H2O60403 315 aa16.27■□□□□ 0.2
SH3RF1-201ENST00000284637 XYLBO75191 536 aa16.27■□□□□ 0.2
SH3RF1-201ENST00000284637 IFI30P13284 250 aa16.27■□□□□ 0.2
SH3RF1-201ENST00000284637 PEG10Q86TG7 708 aaKnown RBP16.27■□□□□ 0.2
SH3RF1-201ENST00000284637 MARVELD2Q8N4S9 558 aa16.27■□□□□ 0.2
SH3RF1-201ENST00000284637 MEIOBQ8N635 442 aa16.27■□□□□ 0.2
SH3RF1-201ENST00000284637 AASDHPPTQ9NRN7 309 aa16.27■□□□□ 0.2
SH3RF1-201ENST00000284637 PHF11Q9UIL8 331 aa16.27■□□□□ 0.2
SH3RF1-201ENST00000284637 PCDHB1Q9Y5F3 818 aa16.27■□□□□ 0.2
SH3RF1-201ENST00000284637 KLF11O14901 512 aa16.27■□□□□ 0.2
SH3RF1-201ENST00000284637 IL1R2P27930 398 aa16.27■□□□□ 0.2
SH3RF1-201ENST00000284637 LIX1Q8N485 282 aa16.27■□□□□ 0.2
SH3RF1-201ENST00000284637 ASCC1Q8N9N2 400 aaKnown RBP16.27■□□□□ 0.2
SH3RF1-201ENST00000284637 GLIS1Q8NBF1 620 aa16.27■□□□□ 0.2
SH3RF1-201ENST00000284637 CLEC4CQ8WTT0 213 aa16.27■□□□□ 0.2
SH3RF1-201ENST00000284637 XPNPEP1Q9NQW7 623 aa16.27■□□□□ 0.2
SH3RF1-201ENST00000284637 KCTD5Q9NXV2 234 aa16.27■□□□□ 0.2
SH3RF1-201ENST00000284637 DPP7Q9UHL4 492 aa16.27■□□□□ 0.2
SH3RF1-201ENST00000284637 MATN3O15232 486 aa16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 RLN1P04808 185 aa16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 SLC9A3P48764 834 aa16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 RAPSNQ13702 412 aa16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 GTF2H2Q13888 395 aa16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 ZBTB6Q15916 424 aa16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 MYLK3Q32MK0 819 aa16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 PARP15Q460N3 678 aa16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 GTF2H2CQ6P1K8 395 aa16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 ZBTB2Q8N680 514 aa16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 MTFR1LQ9H019 292 aa16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 SUCOQ9UBS9 1254 aaKnown RBP16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 COQ4Q9Y3A0 265 aa16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 GPSM3Q9Y4H4 160 aa16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 PEX10O60683 326 aa16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 SNX4O95219 450 aa16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 VNN1O95497 513 aa16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 RPIAP49247 311 aa16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 CDH12P55289 794 aa16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 TGFBIQ15582 683 aa16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 CXorf57Q6NSI4 855 aaKnown RBP16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 SERPINA13PQ6UXR4 307 aa16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 TAC4Q86UU9 113 aa16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 OR8H3Q8N146 312 aa16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 GTPBP3Q969Y2 492 aaKnown RBP16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 OR52B2Q96RD2 323 aa16.27■□□□□ 0.19
SH3RF1-201ENST00000284637 FAM25EA8MYX2 175 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 I3L521 148 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 K7EPI3 171 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 C1RP00736 705 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 RHOQP17081 205 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 L1CAMP32004 1257 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 SLC1A2P43004 574 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 SSR2P43308 183 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 ARF5P84085 180 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 FAM174BQ3ZCQ3 159 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 INTS6LQ5JSJ4 861 aaKnown RBP16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 PTF1AQ7RTS3 328 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 LRP10Q7Z4F1 713 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 ZZZ3Q8IYH5 903 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 CPNE9Q8IYJ1 553 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 ASB9Q96DX5 294 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 GFM1Q96RP9 751 aaKnown RBP16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 NIFKQ9BYG3 293 aaKnown RBP16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 SEMA3GQ9NS98 782 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 EVLQ9UI08 416 aaPredicted RBP16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 FADS2P1A8MWK0 482 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 CXCR6O00574 342 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 CLDN11O75508 207 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 ECDO95905 644 aaPredicted RBP16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 CFHP08603 1231 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 ANXA4P09525 319 aaPredicted RBP16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 HOXC6P09630 235 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 GMFBP60983 142 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 SKP1P63208 163 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 TUSC3Q13454 348 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 NAE1Q13564 534 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 LCN1P1Q5VSP4 162 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 ZDHHC21Q8IVQ6 265 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 CANT1Q8WVQ1 401 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 FCRL4Q96PJ5 515 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 KCNS3Q9BQ31 491 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 SLC39A8Q9C0K1 460 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 ORC5O43913 435 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 CHRNA4P43681 627 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 C9orf64Q5T6V5 341 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 GPR142Q7Z601 462 aa16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 ZNF557Q8N988 423 aaPredicted RBP16.26■□□□□ 0.19
SH3RF1-201ENST00000284637 KAT2AQ92830 837 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms