RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 KLK8O60259 260 aa22.3■■□□□ 1.16
CDX1-201ENST00000231656 ADH1BP00325 375 aa22.3■■□□□ 1.16
CDX1-201ENST00000231656 COX4I1P13073 169 aa22.3■■□□□ 1.16
CDX1-201ENST00000231656 GFAPP14136 432 aa22.3■■□□□ 1.16
CDX1-201ENST00000231656 TSPAN8P19075 237 aa22.3■■□□□ 1.16
CDX1-201ENST00000231656 CCND1P24385 295 aa22.3■■□□□ 1.16
CDX1-201ENST00000231656 ACRV1P26436 265 aa22.3■■□□□ 1.16
CDX1-201ENST00000231656 PPARGP37231 505 aaPredicted RBP22.3■■□□□ 1.16
CDX1-201ENST00000231656 P2RY2P41231 377 aa22.3■■□□□ 1.16
CDX1-201ENST00000231656 PRKCQQ04759 706 aa22.3■■□□□ 1.16
CDX1-201ENST00000231656 CNTN1Q12860 1018 aa22.3■■□□□ 1.16
CDX1-201ENST00000231656 LYPLAL1Q5VWZ2 237 aa22.3■■□□□ 1.16
CDX1-201ENST00000231656 RBFAQ8N0V3 343 aa22.3■■□□□ 1.16
CDX1-201ENST00000231656 FBXO39Q8N4B4 442 aa22.3■■□□□ 1.16
CDX1-201ENST00000231656 ASB2Q96Q27 587 aa22.3■■□□□ 1.16
CDX1-201ENST00000231656 BOCQ9BWV1 1114 aa22.3■■□□□ 1.16
CDX1-201ENST00000231656 FBRSQ9HAH7 460 aa22.3■■□□□ 1.16
CDX1-201ENST00000231656 SYCE1LA8MT33 242 aa22.29■■□□□ 1.16
CDX1-201ENST00000231656 AREL1O15033 823 aa22.29■■□□□ 1.16
CDX1-201ENST00000231656 SKAP2O75563 359 aaPredicted RBP22.29■■□□□ 1.16
CDX1-201ENST00000231656 C5AR1P21730 350 aa22.29■■□□□ 1.16
CDX1-201ENST00000231656 PIK3R1P27986 724 aa22.29■■□□□ 1.16
CDX1-201ENST00000231656 DRD3P35462 400 aa22.29■■□□□ 1.16
CDX1-201ENST00000231656 RPS14P62263 151 aaKnown RBP22.29■■□□□ 1.16
CDX1-201ENST00000231656 MXRA7P84157 204 aa22.29■■□□□ 1.16
CDX1-201ENST00000231656 ELP6Q0PNE2 266 aa22.29■■□□□ 1.16
CDX1-201ENST00000231656 GPR33Q49SQ1 333 aa22.29■■□□□ 1.16
CDX1-201ENST00000231656 TMEM198Q66K66 360 aa22.29■■□□□ 1.16
CDX1-201ENST00000231656 ZNF776Q68DI1 518 aaPredicted RBP22.29■■□□□ 1.16
CDX1-201ENST00000231656 NXNQ6DKJ4 435 aa22.29■■□□□ 1.16
CDX1-201ENST00000231656 ZNF687Q8N1G0 1237 aa22.29■■□□□ 1.16
CDX1-201ENST00000231656 AADATQ8N5Z0 425 aa22.29■■□□□ 1.16
CDX1-201ENST00000231656 GPR26Q8NDV2 337 aa22.29■■□□□ 1.16
CDX1-201ENST00000231656 ACTRT2Q8TDY3 377 aa22.29■■□□□ 1.16
CDX1-201ENST00000231656 PDLIM5Q96HC4 596 aaKnown RBP22.29■■□□□ 1.16
CDX1-201ENST00000231656 TTC1Q99614 292 aa22.29■■□□□ 1.16
CDX1-201ENST00000231656 CLPBQ9H078 707 aa22.29■■□□□ 1.16
CDX1-201ENST00000231656 WNT16Q9UBV4 365 aa22.29■■□□□ 1.16
CDX1-201ENST00000231656 FIS1Q9Y3D6 152 aa22.29■■□□□ 1.16
CDX1-201ENST00000231656 KRBA1A5PL33 1030 aa22.28■■□□□ 1.16
CDX1-201ENST00000231656 GOLGA8CPA6NN73 597 aa22.28■■□□□ 1.16
CDX1-201ENST00000231656 AGAP14A8MT82 685 aa22.28■■□□□ 1.16
CDX1-201ENST00000231656 TM7SF2O76062 418 aa22.28■■□□□ 1.16
CDX1-201ENST00000231656 UGT1A6P19224 532 aa22.28■■□□□ 1.16
CDX1-201ENST00000231656 UGT1A1P22309 533 aa22.28■■□□□ 1.16
CDX1-201ENST00000231656 UGT1A4P22310 534 aa22.28■■□□□ 1.16
CDX1-201ENST00000231656 ADSLP30566 484 aaPredicted RBP22.28■■□□□ 1.16
CDX1-201ENST00000231656 UGT1A3P35503 534 aa22.28■■□□□ 1.16
CDX1-201ENST00000231656 UGT1A5P35504 534 aa22.28■■□□□ 1.16
CDX1-201ENST00000231656 SPINT3P49223 89 aa22.28■■□□□ 1.16
CDX1-201ENST00000231656 CDH13P55290 713 aa22.28■■□□□ 1.16
CDX1-201ENST00000231656 EOGTQ5NDL2 527 aa22.28■■□□□ 1.16
CDX1-201ENST00000231656 LIPIQ6XZB0 460 aa22.28■■□□□ 1.16
CDX1-201ENST00000231656 RFLNAQ6ZTI6 216 aa22.28■■□□□ 1.16
CDX1-201ENST00000231656 HSD11B1LQ7Z5J1 315 aa22.28■■□□□ 1.16
CDX1-201ENST00000231656 CATSPER2Q96P56 530 aa22.28■■□□□ 1.16
CDX1-201ENST00000231656 LENG8Q96PV6 779 aaPredicted RBP22.28■■□□□ 1.16
CDX1-201ENST00000231656 SARS2Q9NP81 518 aaKnown RBP22.28■■□□□ 1.16
CDX1-201ENST00000231656 GNPTGQ9UJJ9 305 aa22.28■■□□□ 1.16
CDX1-201ENST00000231656 PRSS21Q9Y6M0 314 aa22.28■■□□□ 1.16
CDX1-201ENST00000231656 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.28■■□□□ 1.16
CDX1-201ENST00000231656 STX16-NPEPL1H3BU86 382 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 STX16O14662 325 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 CDK14O94921 469 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 CHRNB1P11230 501 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 SH3BP2P78314 561 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 PIP5KL1Q5T9C9 394 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 PTRHD1Q6GMV3 140 aaKnown RBP22.27■■□□□ 1.16
CDX1-201ENST00000231656 PELI3Q8N2H9 469 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 CEP70Q8NHQ1 597 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 RAB7BQ96AH8 199 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 C1QTNF3Q9BXJ4 246 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 PKD2L2Q9NZM6 624 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 CRLS1Q9UJA2 301 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 FBXL21Q9UKT6 434 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 MMP17Q9ULZ9 603 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 LOC100653049A0A140TA62 436 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 H0Y858 1186 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 ENTPD5O75356 428 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 KRT34O76011 436 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 FGF4P08620 206 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 RPS17P08708 135 aaKnown RBP22.27■■□□□ 1.16
CDX1-201ENST00000231656 ELFN1P0C7U0 828 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 CD1EP15812 388 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 EEF1DP29692 281 aaKnown RBP22.27■■□□□ 1.16
CDX1-201ENST00000231656 HK3P52790 923 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 SLC25A3Q00325 362 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 UGT3A2Q3SY77 523 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 ZDHHC20Q5W0Z9 365 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 CLEC6AQ6EIG7 209 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 CYHR1Q6ZMK1 362 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 CHSY3Q70JA7 882 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 NXPE1Q8N323 547 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 LKAAEAR1Q8TD35 194 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 NSUN5Q96P11 429 aaKnown RBP22.27■■□□□ 1.16
CDX1-201ENST00000231656 PLEKHG4BQ96PX9 1271 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 THTPAQ9BU02 230 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 WRAP53Q9BUR4 548 aaKnown RBP22.27■■□□□ 1.16
CDX1-201ENST00000231656 SLC6A17Q9H1V8 727 aa22.27■■□□□ 1.16
CDX1-201ENST00000231656 TMCO1Q9UM00 188 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 201.4 ms