RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 GALNT13Q8IUC8 556 aa16.84■□□□□ 0.29
CACNA1A-253ENST00000637927 STK40Q8N2I9 435 aa16.84■□□□□ 0.29
CACNA1A-253ENST00000637927 HJURPQ8NCD3 748 aaPredicted RBP16.84■□□□□ 0.29
CACNA1A-253ENST00000637927 STAG3L4Q8TBR4 150 aa16.84■□□□□ 0.29
CACNA1A-253ENST00000637927 ZFP3Q96NJ6 502 aa16.84■□□□□ 0.29
CACNA1A-253ENST00000637927 SLC6A15Q9H2J7 730 aa16.84■□□□□ 0.29
CACNA1A-253ENST00000637927 H7C0S8 307 aa16.84■□□□□ 0.29
CACNA1A-253ENST00000637927 hCG_2039718K7EN88 272 aa16.84■□□□□ 0.29
CACNA1A-253ENST00000637927 GABBR2O75899 941 aa16.84■□□□□ 0.29
CACNA1A-253ENST00000637927 HKDC1Q2TB90 917 aa16.84■□□□□ 0.29
CACNA1A-253ENST00000637927 ZCCHC12Q6PEW1 402 aa16.84■□□□□ 0.29
CACNA1A-253ENST00000637927 CEP97Q8IW35 865 aa16.84■□□□□ 0.29
CACNA1A-253ENST00000637927 AP1S3Q96PC3 154 aa16.84■□□□□ 0.29
CACNA1A-253ENST00000637927 MYEF2Q9P2K5 600 aaKnown RBP16.84■□□□□ 0.29
CACNA1A-253ENST00000637927 HPSEQ9Y251 543 aa16.84■□□□□ 0.29
CACNA1A-253ENST00000637927 LDB2O43679 373 aa16.83■□□□□ 0.29
CACNA1A-253ENST00000637927 TRBC1P01850 177 aa16.83■□□□□ 0.29
CACNA1A-253ENST00000637927 MARCKSL1P49006 195 aa16.83■□□□□ 0.29
CACNA1A-253ENST00000637927 ZNF234Q14588 700 aa16.83■□□□□ 0.29
CACNA1A-253ENST00000637927 TREML1Q86YW5 311 aa16.83■□□□□ 0.29
CACNA1A-253ENST00000637927 TMPRSS6Q8IU80 811 aa16.83■□□□□ 0.29
CACNA1A-253ENST00000637927 RELL1Q8IUW5 271 aa16.83■□□□□ 0.29
CACNA1A-253ENST00000637927 TSEN2Q8NCE0 465 aaKnown RBP16.83■□□□□ 0.29
CACNA1A-253ENST00000637927 FRMPD4Q14CM0 1322 aa16.83■□□□□ 0.29
CACNA1A-253ENST00000637927 BTBD19C9JJ37 291 aa16.83■□□□□ 0.29
CACNA1A-253ENST00000637927 LSM1O15116 133 aaKnown RBP16.83■□□□□ 0.29
CACNA1A-253ENST00000637927 COL6A1P12109 1028 aa16.83■□□□□ 0.29
CACNA1A-253ENST00000637927 ZNF20P17024 532 aa16.83■□□□□ 0.29
CACNA1A-253ENST00000637927 MTHFRP42898 656 aa16.83■□□□□ 0.29
CACNA1A-253ENST00000637927 CAPSQ13938 189 aa16.83■□□□□ 0.29
CACNA1A-253ENST00000637927 HERVK_113Q902F9 699 aa16.83■□□□□ 0.29
CACNA1A-253ENST00000637927 FCF1Q9Y324 198 aaKnown RBP16.83■□□□□ 0.29
CACNA1A-253ENST00000637927 WASH3PC4AMC7 463 aa16.83■□□□□ 0.28
CACNA1A-253ENST00000637927 CSF2P04141 144 aa16.83■□□□□ 0.28
CACNA1A-253ENST00000637927 MAPTP10636 758 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-253ENST00000637927 TEAD4Q15561 434 aa16.83■□□□□ 0.28
CACNA1A-253ENST00000637927 NTRK3Q16288 839 aa16.83■□□□□ 0.28
CACNA1A-253ENST00000637927 CARD16Q5EG05 197 aa16.83■□□□□ 0.28
CACNA1A-253ENST00000637927 ETNPPLQ8TBG4 499 aa16.83■□□□□ 0.28
CACNA1A-253ENST00000637927 TNFRSF25Q93038 417 aa16.83■□□□□ 0.28
CACNA1A-253ENST00000637927 MRTO4Q9UKD2 239 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-253ENST00000637927 PER2O15055 1255 aa16.83■□□□□ 0.28
CACNA1A-253ENST00000637927 GNRH1P01148 92 aa16.83■□□□□ 0.28
CACNA1A-253ENST00000637927 TOR1AIP2Q8NFQ8 470 aa16.83■□□□□ 0.28
CACNA1A-253ENST00000637927 CYB5D2Q8WUJ1 264 aa16.83■□□□□ 0.28
CACNA1A-253ENST00000637927 SMG7Q92540 1137 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-253ENST00000637927 EIF2B3Q9NR50 452 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-253ENST00000637927 SLC9A3R1O14745 358 aaPredicted RBP16.83■□□□□ 0.28
CACNA1A-253ENST00000637927 FGF10O15520 208 aaPredicted RBP16.83■□□□□ 0.28
CACNA1A-253ENST00000637927 EPHA3P29320 983 aa16.83■□□□□ 0.28
CACNA1A-253ENST00000637927 RPL7AP62424 266 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-253ENST00000637927 MAP4K3Q8IVH8 894 aa16.83■□□□□ 0.28
CACNA1A-253ENST00000637927 CMTR2Q8IYT2 770 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-253ENST00000637927 AUTS2Q8WXX7 1259 aa16.83■□□□□ 0.28
CACNA1A-253ENST00000637927 EXD2Q9NVH0 621 aa16.83■□□□□ 0.28
CACNA1A-253ENST00000637927 A0A0A0MRY4 1105 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 FKBP6O75344 327 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 SLC10A7Q0GE19 358 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 CHSY3Q70JA7 882 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 SPATA13Q96N96 652 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 SPATA5L1Q9BVQ7 753 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 CDT1Q9H211 546 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 TMEM165Q9HC07 324 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 MDFIC2A0A1B0GVS7 189 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 PAGE1O75459 146 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 IPO13O94829 963 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 SLC34A1Q06495 639 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 CD47Q08722 323 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 GPR139Q6DWJ6 353 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 DENND5AQ6IQ26 1287 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 CRYBG2Q8N1P7 616 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 RASGEF1CQ8N431 466 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 DOK4Q8TEW6 326 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 UROC1Q96N76 676 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 BCAS3Q9H6U6 928 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 PDP1Q9P0J1 537 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 TBC1D30Q9Y2I9 924 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 SIGLEC16A6NMB1 481 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 EDN3P14138 238 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 FLT3LGP49771 235 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 MAP2K5Q13163 448 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 ENPP7Q6UWV6 458 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 DNAJA4Q8WW22 397 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 DIP2BQ9P265 1576 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 KLRG2A4D1S0 409 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 ZNF726A6NNF4 738 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 UBE2UQ5VVX9 321 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 TTC29Q8NA56 475 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 PRICKLE1Q96MT3 831 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 NOL11Q9H8H0 719 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 PPP1R14DQ9NXH3 145 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 TMEM216Q9P0N5 145 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 GSKIPQ9P0R6 139 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 EIF3KQ9UBQ5 218 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 PFDN2Q9UHV9 154 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 DDR1Q08345 913 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 FAM46CQ5VWP2 391 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 ZCCHC9Q8N567 271 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 OR8S1Q8NH09 359 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 APOC4-APOC2K7ER74 178 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms