RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 NFKBIAP25963 317 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 AK4P27144 223 aaPredicted RBP9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 CASQ1P31415 396 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 MAGEA6P43360 314 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 GNPDA1P46926 289 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 FNTAP49354 379 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 NOVA1P51513 510 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 PPARDQ03181 441 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 PTK2BQ14289 1009 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 ADGRG6Q86SQ4 1221 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 SLCO6A1Q86UG4 719 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 CAND1Q86VP6 1230 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 RAVER1Q8IY67 606 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 MPP5Q8N3R9 675 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 OXR1Q8N573 874 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 TRAM1L1Q8N609 369 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 OR13J1Q8NGT2 312 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 GLYATL1Q969I3 302 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 HIC2Q96JB3 615 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 PWWP2AQ96N64 755 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 PLEKHG4BQ96PX9 1271 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 TRIM51Q9BSJ1 452 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 FAM96AQ9H5X1 160 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 CARS2Q9HA77 564 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 PHPT1Q9NRX4 125 aaPredicted RBP9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 HOMER3Q9NSC5 361 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 HACD3Q9P035 362 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 ATXN10Q9UBB4 475 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 SLC23A2Q9UGH3 650 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 MOSPD1Q9UJG1 213 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 DGKBQ9Y6T7 804 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 PLXNB3Q9ULL4 1909 aa9.36□□□□□ -0.91
NPLOC4-219ENST00000576713 COL5A1P20908 1838 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 GLYATL1P3A0A0U1RQE8 302 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 E7EVH7 732 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 GOLGA8MH3BSY2 632 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 TNFRSF10CO14798 259 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 STX7O15400 261 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 TTI1O43156 1089 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 SGTAO43765 313 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 DFNA5O60443 496 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 WISP1O95388 367 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 PRAMEF1O95521 474 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 CTSBP07858 339 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 TPSB2P20231 275 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 LPOP22079 712 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 PSMA3P25788 255 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 HTR1BP28222 390 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 SPAM1P38567 509 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 ADCY8P40145 1251 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 GRK6P43250 576 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 SESN2P58004 480 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 HNRNPKP61978 463 aaKnown RBP eCLIP9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 B4GALNT1Q00973 533 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 C2orf54Q08AI8 447 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 CDH17Q12864 832 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 PTK6Q13882 451 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 SEPT6Q14141 434 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 TPSAB1Q15661 275 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 SMAD1Q15797 465 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 PYCR3Q53H96 274 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 N4BP2L1Q5TBK1 243 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 MARCH9Q86YJ5 346 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 ZNF547Q8IVP9 402 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 PIANPQ8IYJ0 282 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 NAT8LQ8N9F0 302 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 OR4C6Q8NH72 309 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 UBASH3BQ8TF42 649 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 BTN2A2Q8WVV5 523 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 PATE1Q8WXA2 126 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 SLCO2A1Q92959 643 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 PPP1R2P1Q96PQ5 205 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 NAP1L3Q99457 506 aaPredicted RBP9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 ZSCAN5AQ9BUG6 496 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 MRPL18Q9H0U6 180 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 OR2AG1Q9H205 316 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 EIF2B3Q9NR50 452 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 SPATS2LQ9NUQ6 558 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 SYBUQ9NX95 663 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 PCYOX1Q9UHG3 505 aa9.35□□□□□ -0.91
NPLOC4-219ENST00000576713 CCDC162PA2VCL2 907 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 C2orf81A6NN90 581 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 ERI2A8K979 691 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 AGAP14A8MT82 685 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 LMO7DNF2Z398 122 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 PSMD3O43242 534 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 BANF1O75531 89 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 SRP72O76094 671 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 RASGRP1O95267 797 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 DLGAP3O95886 979 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 IVLP07476 585 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 F7P08709 466 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 GSTP1P09211 210 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 CEACAM1P13688 526 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 MGAT1P26572 445 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 PMLP29590 882 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 MC4RP32245 332 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 TNNT3P45378 269 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 LMAN1P49257 510 aa9.34□□□□□ -0.91
NPLOC4-219ENST00000576713 CTSCP53634 463 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms