RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 CD1CP29017 333 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 CCKBRP32239 447 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 FOXN2P32314 431 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 HALP42357 657 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 FNTAP49354 379 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 PRLHRP49683 370 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 PRAMEP78395 509 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 DMPKQ09013 629 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 KCNJ11Q14654 390 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 TPSAB1Q15661 275 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 DBN1Q16643 649 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 AGAP9Q5VTM2 703 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 ZNF534Q76KX8 674 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 PIM3Q86V86 326 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 SLITRK4Q8IW52 837 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 PIANPQ8IYJ0 282 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 AVL9Q8NBF6 648 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 OR10G6Q8NH81 332 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 HEXDCQ8WVB3 486 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 HDAC10Q969S8 669 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.61□□□□□ -0.55
RAB5C-204ENST00000547517 SH3KBP1Q96B97 665 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 CXorf40BQ96DE9 158 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 LIN37Q96GY3 246 aaPredicted RBP11.61□□□□□ -0.55
RAB5C-204ENST00000547517 CCDC74BQ96LY2 380 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 TBC1D10AQ9BXI6 508 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 SEMA6CQ9H3T2 930 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 POT1Q9NUX5 634 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 SYBUQ9NX95 663 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 ZNF624Q9P2J8 865 aaPredicted RBP11.61□□□□□ -0.55
RAB5C-204ENST00000547517 PSMD13Q9UNM6 376 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 WDR37Q9Y2I8 494 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 DNMT3AQ9Y6K1 912 aaPredicted RBP11.61□□□□□ -0.55
RAB5C-204ENST00000547517 IGLV3-16A0A075B6K0 115 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 PRAMEF33A0A0G2JMD5 474 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 CTAGE9A4FU28 777 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 MGAT4DA6NG13 374 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 TMX2-CTNND1H3BSU7 103 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 TLX3O43711 291 aaPredicted RBP11.6□□□□□ -0.55
RAB5C-204ENST00000547517 KCNJ13O60928 360 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 TMEM63AO94886 807 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 HGFP14210 728 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 HOXB3P14651 431 aaPredicted RBP11.6□□□□□ -0.55
RAB5C-204ENST00000547517 MPSTP25325 297 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 PSMA3P25788 255 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 MGAT1P26572 445 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 SLC19A1P41440 591 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 LSSP48449 732 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 GPLD1P80108 840 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 ZFP36L1Q07352 338 aaKnown RBP11.6□□□□□ -0.55
RAB5C-204ENST00000547517 CLCA4Q14CN2 919 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 TBC1D25Q3MII6 688 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 PCID2Q5JVF3 399 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 ANKRD22Q5VYY1 191 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 ABRAXAS1Q6UWZ7 409 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 WASH2PQ6VEQ5 465 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 RAB11FIP2Q7L804 512 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 NLRP9Q7RTR0 991 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 C17orf53Q8N3J3 647 aaPredicted RBP11.6□□□□□ -0.55
RAB5C-204ENST00000547517 RCBTB1Q8NDN9 531 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 GPR150Q8NGU9 434 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 OR6P1Q8NGX9 317 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 OR2L2Q8NH16 312 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 WDR36Q8NI36 951 aaKnown RBP11.6□□□□□ -0.55
RAB5C-204ENST00000547517 HM13Q8TCT9 377 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 GRK7Q8WTQ7 553 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 DCBLD2Q96PD2 775 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.6□□□□□ -0.55
RAB5C-204ENST00000547517 IL22Q9GZX6 179 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 DDX47Q9H0S4 455 aaKnown RBP11.6□□□□□ -0.55
RAB5C-204ENST00000547517 WASH6PQ9NQA3 447 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 CHRAC1Q9NRG0 131 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 IMP3Q9NV31 184 aaKnown RBP11.6□□□□□ -0.55
RAB5C-204ENST00000547517 TMEM9Q9P0T7 183 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 RIMKLBQ9ULI2 386 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 LOXL2Q9Y4K0 774 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 PCDHGA8Q9Y5G5 932 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 CFAP20Q9Y6A4 193 aaKnown RBP11.6□□□□□ -0.55
RAB5C-204ENST00000547517 KNTC1P50748 2209 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 DMXL2Q8TDJ6 3036 aa11.6□□□□□ -0.55
RAB5C-204ENST00000547517 CELSR3Q9NYQ7 3312 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 IGHV5-10-1A0A0J9YXX1 117 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 LILRA5A6NI73 299 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 GOLGA8MH3BSY2 632 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 AP3B1O00203 1094 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 PLD2O14939 933 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 TNFSF15O95150 251 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 SLC35G4P0C7Q5 338 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 XRCC1P18887 633 aaPredicted RBP11.59□□□□□ -0.55
RAB5C-204ENST00000547517 RBMS1P29558 406 aaKnown RBP11.59□□□□□ -0.55
RAB5C-204ENST00000547517 MAGEA6P43360 314 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 EPHA4P54764 986 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 CDK16Q00536 496 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 CFHR1Q03591 330 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 ACVR1Q04771 509 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 EIF3IQ13347 325 aaKnown RBP11.59□□□□□ -0.55
RAB5C-204ENST00000547517 PPP1R7Q15435 360 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 RPE65Q16518 533 aa11.59□□□□□ -0.55
RAB5C-204ENST00000547517 CLPPQ16740 277 aaPredicted RBP11.59□□□□□ -0.55
RAB5C-204ENST00000547517 PAPD7Q5XG87 772 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms