RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 GALNT3Q14435 633 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 TEAD2Q15562 447 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 NRF1Q16656 503 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 ZNF829Q3KNS6 432 aaPredicted RBP18.11■□□□□ 0.49
SDC2-202ENST00000518385 MTX3Q5HYI7 312 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 C6orf10Q5SRN2 563 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 KLHL35Q6PF15 583 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 TTC33Q6PID6 262 aaPredicted RBP18.11■□□□□ 0.49
SDC2-202ENST00000518385 SPRED1Q7Z699 444 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 PTAR1Q7Z6K3 402 aaPredicted RBP18.11■□□□□ 0.49
SDC2-202ENST00000518385 CUZD1Q86UP6 607 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 TRIM74Q86UV6 250 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 TRIM73Q86UV7 250 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 CEP97Q8IW35 865 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 MFSD6LQ8IWD5 586 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 TXNDC5Q8NBS9 432 aaKnown RBP18.11■□□□□ 0.49
SDC2-202ENST00000518385 FIBINQ8TAL6 211 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 CENPNQ96H22 339 aaPredicted RBP18.11■□□□□ 0.49
SDC2-202ENST00000518385 TBATAQ96M53 351 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 GPATCH1Q9BRR8 931 aaKnown RBP18.11■□□□□ 0.49
SDC2-202ENST00000518385 MAGEE1Q9HCI5 957 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 ACTR3BQ9P1U1 418 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 CFAP97Q9P2B7 532 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 LHX3Q9UBR4 397 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 PCDHGB4Q9UN71 923 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 PCDHGB5Q9Y5G0 923 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 RANBP2P49792 3224 aaKnown RBP18.11■□□□□ 0.49
SDC2-202ENST00000518385 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.1■□□□□ 0.49
SDC2-202ENST00000518385 PRORSD1PA6NEY8 169 aa18.1■□□□□ 0.49
SDC2-202ENST00000518385 ANKRD66B4E2M5 251 aa18.1■□□□□ 0.49
SDC2-202ENST00000518385 FBP2O00757 339 aa18.1■□□□□ 0.49
SDC2-202ENST00000518385 NOL3O60936 208 aaKnown RBP18.1■□□□□ 0.49
SDC2-202ENST00000518385 MATN4O95460 622 aa18.1■□□□□ 0.49
SDC2-202ENST00000518385 ESRRBO95718 433 aa18.1■□□□□ 0.49
SDC2-202ENST00000518385 PRLP01236 227 aa18.1■□□□□ 0.49
SDC2-202ENST00000518385 IMPDH1P20839 514 aa18.1■□□□□ 0.49
SDC2-202ENST00000518385 LPOP22079 712 aaPredicted RBP18.1■□□□□ 0.49
SDC2-202ENST00000518385 PSMA4P25789 261 aaKnown RBP18.1■□□□□ 0.49
SDC2-202ENST00000518385 DCKP27707 260 aa18.1■□□□□ 0.49
SDC2-202ENST00000518385 MZF1P28698 734 aaPredicted RBP18.1■□□□□ 0.49
SDC2-202ENST00000518385 ZNF140P52738 457 aaPredicted RBP18.1■□□□□ 0.49
SDC2-202ENST00000518385 TMED1Q13445 227 aa18.1■□□□□ 0.49
SDC2-202ENST00000518385 HECTD2Q5U5R9 776 aa18.1■□□□□ 0.49
SDC2-202ENST00000518385 AFTPHQ6ULP2 937 aa18.1■□□□□ 0.49
SDC2-202ENST00000518385 CMTM8Q8IZV2 173 aa18.1■□□□□ 0.49
SDC2-202ENST00000518385 C12orf76Q8N812 135 aaPredicted RBP18.1■□□□□ 0.49
SDC2-202ENST00000518385 ZNF557Q8N988 423 aaPredicted RBP18.1■□□□□ 0.49
SDC2-202ENST00000518385 SMG7Q92540 1137 aaKnown RBP18.1■□□□□ 0.49
SDC2-202ENST00000518385 PPWD1Q96BP3 646 aaKnown RBP18.1■□□□□ 0.49
SDC2-202ENST00000518385 ISOC1Q96CN7 298 aa18.1■□□□□ 0.49
SDC2-202ENST00000518385 ITPKCQ96DU7 683 aa18.1■□□□□ 0.49
SDC2-202ENST00000518385 CDKN2AIPNLQ96HQ2 116 aa18.1■□□□□ 0.49
SDC2-202ENST00000518385 SFXN1Q9H9B4 322 aa18.1■□□□□ 0.49
SDC2-202ENST00000518385 CATSPERZQ9NTU4 200 aa18.1■□□□□ 0.49
SDC2-202ENST00000518385 DZANK1Q9NVP4 752 aa18.1■□□□□ 0.49
SDC2-202ENST00000518385 VPS51Q9UID3 782 aa18.1■□□□□ 0.49
SDC2-202ENST00000518385 CCDC162PA2VCL2 907 aa18.09■□□□□ 0.49
SDC2-202ENST00000518385 LEFTY2O00292 366 aa18.09■□□□□ 0.49
SDC2-202ENST00000518385 GOT2P00505 430 aaKnown RBP18.09■□□□□ 0.49
SDC2-202ENST00000518385 CYBBP04839 570 aa18.09■□□□□ 0.49
SDC2-202ENST00000518385 HNRNPCP07910 306 aaKnown RBP eCLIP18.09■□□□□ 0.491e-6■■■■□ 19.7
SDC2-202ENST00000518385 FGF4P08620 206 aa18.09■□□□□ 0.49
SDC2-202ENST00000518385 CSKP41240 450 aa18.09■□□□□ 0.49
SDC2-202ENST00000518385 GALK1P51570 392 aa18.09■□□□□ 0.49
SDC2-202ENST00000518385 RHOAP61586 193 aa18.09■□□□□ 0.49
SDC2-202ENST00000518385 TUBA3CQ13748 450 aa18.09■□□□□ 0.49
SDC2-202ENST00000518385 ATP6AP1Q15904 470 aa18.09■□□□□ 0.49
SDC2-202ENST00000518385 TYSND1Q2T9J0 566 aa18.09■□□□□ 0.49
SDC2-202ENST00000518385 AASDHQ4L235 1098 aaPredicted RBP18.09■□□□□ 0.49
SDC2-202ENST00000518385 HMBOX1Q6NT76 420 aa18.09■□□□□ 0.49
SDC2-202ENST00000518385 PAOXQ6QHF9 649 aa18.09■□□□□ 0.49
SDC2-202ENST00000518385 ABRAXAS1Q6UWZ7 409 aa18.09■□□□□ 0.49
SDC2-202ENST00000518385 CHRDL2Q6WN34 429 aa18.09■□□□□ 0.49
SDC2-202ENST00000518385 TMEM184AQ6ZMB5 413 aa18.09■□□□□ 0.49
SDC2-202ENST00000518385 GLT6D1Q7Z4J2 308 aa18.09■□□□□ 0.49
SDC2-202ENST00000518385 PCDH20Q8N6Y1 951 aaKnown RBP18.09■□□□□ 0.49
SDC2-202ENST00000518385 RNF148Q8N7C7 305 aa18.09■□□□□ 0.49
SDC2-202ENST00000518385 HEXDCQ8WVB3 486 aa18.09■□□□□ 0.49
SDC2-202ENST00000518385 UBXN10Q96LJ8 280 aa18.09■□□□□ 0.49
SDC2-202ENST00000518385 ADI1Q9BV57 179 aa18.09■□□□□ 0.49
SDC2-202ENST00000518385 AGPAT4Q9NRZ5 378 aa18.09■□□□□ 0.49
SDC2-202ENST00000518385 IGSF5Q9NSI5 407 aa18.09■□□□□ 0.49
SDC2-202ENST00000518385 ARL5AQ9Y689 179 aa18.09■□□□□ 0.49
SDC2-202ENST00000518385 DHRS12A0PJE2 317 aa18.08■□□□□ 0.49
SDC2-202ENST00000518385 GRXCR2A6NFK2 248 aa18.08■□□□□ 0.49
SDC2-202ENST00000518385 GJB3O75712 270 aa18.08■□□□□ 0.49
SDC2-202ENST00000518385 RASAL1O95294 804 aa18.08■□□□□ 0.49
SDC2-202ENST00000518385 GMPRP36959 345 aa18.08■□□□□ 0.49
SDC2-202ENST00000518385 AVPR1AP37288 418 aa18.08■□□□□ 0.49
SDC2-202ENST00000518385 GLRBP48167 497 aa18.08■□□□□ 0.49
SDC2-202ENST00000518385 MERTKQ12866 999 aa18.08■□□□□ 0.49
SDC2-202ENST00000518385 SLC36A3Q495N2 470 aa18.08■□□□□ 0.49
SDC2-202ENST00000518385 TMC5Q6UXY8 1006 aa18.08■□□□□ 0.49
SDC2-202ENST00000518385 PRR23BQ6ZRT6 265 aa18.08■□□□□ 0.49
SDC2-202ENST00000518385 LARP4Q71RC2 724 aaKnown RBP eCLIP18.08■□□□□ 0.49
SDC2-202ENST00000518385 EFL1Q7Z2Z2 1120 aaKnown RBP18.08■□□□□ 0.49
SDC2-202ENST00000518385 CLYBLQ8N0X4 340 aa18.08■□□□□ 0.49
SDC2-202ENST00000518385 FAM47BQ8NA70 645 aa18.08■□□□□ 0.49
SDC2-202ENST00000518385 PAPD5Q8NDF8 572 aaKnown RBP18.08■□□□□ 0.49
SDC2-202ENST00000518385 NSUN3Q9H649 340 aaKnown RBP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms