RNA–Protein interactions for RNA: ENST00000516232.1

RNA5SP228-201, Transcript of RNA, 5S ribosomal pseudogene 228, humanhuman

BASIC

Gene RNA5SP228, Length 133 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNA5SP228-201ENST00000516232 CLDN16Q9Y5I7 305 aa5.09□□□□□ -1.59
RNA5SP228-201ENST00000516232 SPO11Q9Y5K1 396 aa5.09□□□□□ -1.59
RNA5SP228-201ENST00000516232 MAP1AP78559 2803 aaPredicted RBP5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 TBC1D3DA0A087WVF3 549 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 TBC1D3IA0A087WXS9 549 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 TBC1D3EA0A087X179 549 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 TBC1D3KA0A087X1G2 549 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 A4D1N5 150 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 ARHGEF35A5YM69 484 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 TBC1D3FA6NER0 549 aaPredicted RBP5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 ANKUB1A6NFN9 424 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 TBC1D3LB9A6J9 549 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 F8VP50 259 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 MYO1FO00160 1098 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 LATO43561 262 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 KRT86O43790 486 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 CCNT1O60563 726 aaKnown RBP5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 FTCDO95954 541 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 TK1P04183 234 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 RPLP0P05388 317 aaKnown RBP5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 SCG5P05408 212 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 TBC1D3HP0C7X1 549 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 TPBGLP0DKB5 382 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 MTHFD2P13995 350 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 ACPPP15309 386 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 CYP11B2P19099 503 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 TRIM21P19474 475 aaKnown RBP5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 KLK2P20151 261 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 ITGB7P26010 798 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 AOAHP28039 575 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 SLC7A1P30825 629 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 CCKBRP32239 447 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 UGT1A3P35503 534 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 ADD1P35611 737 aaKnown RBP5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 PSMD8P48556 350 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 PER3P56645 1201 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 SH3BP2P78314 561 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 CYP27A1Q02318 531 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 GALNT2Q10471 571 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 NR5A1Q13285 461 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 NNTQ13423 1086 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 TMEM132DQ14C87 1099 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 GPR68Q15743 365 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 CST6Q15828 149 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 BMT2Q1RMZ1 405 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 SH2D4BQ5SQS7 431 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 ERMARDQ5T6L9 678 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 CES4AQ5XG92 561 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 ATG16L1Q676U5 607 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 TBC1D3GQ6DHY5 549 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 TBC1D3CQ6IPX1 549 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 KRT80Q6KB66 452 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 CAVIN1Q6NZI2 390 aaKnown RBP5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 KLHDC10Q6PID8 442 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 TRAT1Q6PIZ9 186 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 FAM83HQ6ZRV2 1179 aaPredicted RBP5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 HTR3DQ70Z44 454 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 OSTM1Q86WC4 334 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 RFX6Q8HWS3 928 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 TGIF2LYQ8IUE0 185 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 CCDC117Q8IWD4 279 aaPredicted RBP5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 SLC35F3Q8IY50 421 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 ULK2Q8IYT8 1036 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 UNC5BQ8IZJ1 945 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 TBC1D3Q8IZP1 549 aaPredicted RBP5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 NAGSQ8N159 534 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 SCML4Q8N228 414 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 RTL3Q8N8U3 475 aaKnown RBP5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 TRIM58Q8NG06 486 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 OR6B3Q8NGW1 331 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 NAT6Q93015 286 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 KIAA1143Q96AT1 154 aaPredicted RBP5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 HDAC11Q96DB2 347 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 IQCDQ96DY2 449 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 FAM111AQ96PZ2 611 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 SH3GL2Q99962 352 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 ACBD6Q9BR61 282 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 CPEB1Q9BZB8 566 aaKnown RBP5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 ZCCHC2Q9C0B9 1178 aaKnown RBP5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 MTMR12Q9C0I1 747 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 VCX3BQ9H321 246 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 XKR8Q9H6D3 395 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 MRPL44Q9H9J2 332 aaKnown RBP5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 GDAP2Q9NXN4 497 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 CWC15Q9P013 229 aaKnown RBP5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 MRPL15Q9P015 296 aaKnown RBP5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 NDUFAF4Q9P032 175 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 SPATA7Q9P0W8 599 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 ARHGAP20Q9P2F6 1191 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 FETUBQ9UGM5 382 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 CYTH4Q9UIA0 394 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 TLK1Q9UKI8 766 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 PSME2Q9UL46 239 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 CNOT6Q9ULM6 557 aaKnown RBP5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 FZD4Q9ULV1 537 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 CLEC4EQ9ULY5 219 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 SCML1Q9UN30 329 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 LIPT1Q9Y234 373 aa5.08□□□□□ -1.6
RNA5SP228-201ENST00000516232 KCTD3Q9Y597 815 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms