RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 SRRM1Q8IYB3 904 aaKnown RBP13.11□□□□□ -0.31
BRAT1-205ENST00000473879 CYP4X1Q8N118 509 aa13.11□□□□□ -0.31
BRAT1-205ENST00000473879 KRT222Q8N1A0 295 aa13.11□□□□□ -0.31
BRAT1-205ENST00000473879 TP53I13Q8NBR0 393 aaPredicted RBP13.11□□□□□ -0.31
BRAT1-205ENST00000473879 MZB1Q8WU39 189 aa13.11□□□□□ -0.31
BRAT1-205ENST00000473879 ALKBH8Q96BT7 664 aaKnown RBP13.11□□□□□ -0.31
BRAT1-205ENST00000473879 ATXN7L3BQ96GX2 97 aa13.11□□□□□ -0.31
BRAT1-205ENST00000473879 SMC6Q96SB8 1091 aa13.11□□□□□ -0.31
BRAT1-205ENST00000473879 GPR22Q99680 433 aa13.11□□□□□ -0.31
BRAT1-205ENST00000473879 MCMBPQ9BTE3 642 aa13.11□□□□□ -0.31
BRAT1-205ENST00000473879 SPATA16Q9BXB7 569 aa13.11□□□□□ -0.31
BRAT1-205ENST00000473879 CCDC68Q9H2F9 335 aa13.11□□□□□ -0.31
BRAT1-205ENST00000473879 SMOXQ9NWM0 555 aa13.11□□□□□ -0.31
BRAT1-205ENST00000473879 TOR4AQ9NXH8 423 aa13.11□□□□□ -0.31
BRAT1-205ENST00000473879 FAM53CQ9NYF3 392 aa13.11□□□□□ -0.31
BRAT1-205ENST00000473879 COMMD10Q9Y6G5 202 aa13.11□□□□□ -0.31
BRAT1-205ENST00000473879 TPRP12270 2363 aaKnown RBP13.11□□□□□ -0.31
BRAT1-205ENST00000473879 KMT2BQ9UMN6 2715 aaPredicted RBP13.11□□□□□ -0.31
BRAT1-205ENST00000473879 ACACBO00763 2458 aa13.11□□□□□ -0.31
BRAT1-205ENST00000473879 CABIN1Q9Y6J0 2220 aa13.11□□□□□ -0.31
BRAT1-205ENST00000473879 CHD8Q9HCK8 2581 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 SPTY2D1-AS1A0A0U1RR47 76 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 FAM95CA0A1B0GW59 222 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 UBA6A0AVT1 1052 aaPredicted RBP13.1□□□□□ -0.31
BRAT1-205ENST00000473879 FAM221BA6H8Z2 402 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 GOLGA8CPA6NN73 597 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 AGAP14A8MT82 685 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 RECQL5O94762 991 aaPredicted RBP13.1□□□□□ -0.31
BRAT1-205ENST00000473879 DKK1O94907 266 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 HAUS5O94927 633 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 TOP3BO95985 862 aaKnown RBP13.1□□□□□ -0.31
BRAT1-205ENST00000473879 ZNF7P17097 686 aaPredicted RBP13.1□□□□□ -0.31
BRAT1-205ENST00000473879 ACRV1P26436 265 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 IGFALSP35858 605 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 SLC12A2P55011 1212 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 YPEL5P62699 121 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 FZD2Q14332 565 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 SEMA3AQ14563 771 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 ITIH4Q14624 930 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 FAM45BPQ6NSW5 357 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 NLRP8Q86W28 1048 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 SERPINA9Q86WD7 417 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 PIANPQ8IYJ0 282 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 RBFAQ8N0V3 343 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 NXPE1Q8N323 547 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 ARFGAP2Q8N6H7 521 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 EID2Q8N6I1 236 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 GPATCH11Q8N954 259 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 FAM45AQ8TCE6 357 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 ACMSDQ8TDX5 336 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 ISL2Q96A47 359 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 AP2M1Q96CW1 435 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 TSPAN17Q96FV3 270 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 ELMO2Q96JJ3 720 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 CABS1Q96KC9 395 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 VPS35Q96QK1 796 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 SCNM1Q9BWG6 230 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 ABCG8Q9H221 673 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 FAM96AQ9H5X1 160 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 SSU72Q9NP77 194 aaKnown RBP13.1□□□□□ -0.31
BRAT1-205ENST00000473879 FTSJ1Q9UET6 329 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 CD84Q9UIB8 345 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 NEUROG3Q9Y4Z2 214 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 PCDHB1Q9Y5F3 818 aa13.1□□□□□ -0.31
BRAT1-205ENST00000473879 F8W8V4 182 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 HYAL3O43820 417 aaPredicted RBP13.09□□□□□ -0.31
BRAT1-205ENST00000473879 PIAS2O75928 621 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 LDOC1O95751 146 aaPredicted RBP13.09□□□□□ -0.31
BRAT1-205ENST00000473879 CSF2P04141 144 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 PRSS56P0CW18 603 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 NR1D1P20393 614 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 DGKAP23743 735 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 GABRB3P28472 473 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 ADARP55265 1226 aaKnown RBP13.09□□□□□ -0.31
BRAT1-205ENST00000473879 HNRNPKP61978 463 aaKnown RBP eCLIP13.09□□□□□ -0.31
BRAT1-205ENST00000473879 POU4F1Q01851 419 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 DPTQ07507 201 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 PDE1CQ14123 709 aaPredicted RBP13.09□□□□□ -0.31
BRAT1-205ENST00000473879 PTK2BQ14289 1009 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 USP10Q14694 798 aaKnown RBP13.09□□□□□ -0.31
BRAT1-205ENST00000473879 LRRC14Q15048 493 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 DBN1Q16643 649 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 WSCD2Q2TBF2 565 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 ATP13A5Q4VNC0 1218 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 CNSTQ6PJW8 725 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 RFLNAQ6ZTI6 216 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 CCDC91Q7Z6B0 441 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 LDB1Q86U70 411 aaPredicted RBP13.09□□□□□ -0.31
BRAT1-205ENST00000473879 EXOC3L1Q86VI1 746 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 PARGQ86W56 976 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 SLC25A45Q8N413 288 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 CHCHD4Q8N4Q1 142 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 PNPLA1Q8N8W4 532 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 HEXDCQ8WVB3 486 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 LPGAT1Q92604 370 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 SCAMP4Q969E2 229 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 CNDP2Q96KP4 475 aaKnown RBP13.09□□□□□ -0.31
BRAT1-205ENST00000473879 CNTNAP3BQ96NU0 1288 aa13.09□□□□□ -0.31
BRAT1-205ENST00000473879 RIOK2Q9BVS4 552 aaKnown RBP13.09□□□□□ -0.31
BRAT1-205ENST00000473879 CNTNAP3Q9BZ76 1288 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms