RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 SAT1P21673 171 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 HNRNPA2B1P22626 353 aaKnown RBP12.56□□□□□ -0.4
TRAF4-208ENST00000469529 SERPINB4P48594 390 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 IRF4Q15306 451 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 SEPT7Q16181 437 aaKnown RBP12.56□□□□□ -0.4
TRAF4-208ENST00000469529 TTLL9Q3SXZ7 439 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 HHATQ5VTY9 493 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 KIAA0895LQ68EN5 471 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 KLC3Q6P597 504 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 LVRNQ6Q4G3 990 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 CYHR1Q6ZMK1 362 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 CACUL1Q86Y37 369 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 RASGRP3Q8IV61 690 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 FSTL5Q8N475 847 aaPredicted RBP12.56□□□□□ -0.4
TRAF4-208ENST00000469529 ZBTB2Q8N680 514 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 DTWD2Q8NBA8 298 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 TMEM145Q8NBT3 493 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 OR6Y1Q8NGX8 325 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 GDAP1Q8TB36 358 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 KCTD4Q8WVF5 259 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 ASZ1Q8WWH4 475 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 KIAA1191Q96A73 305 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 SGF29Q96ES7 293 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 CCDC97Q96F63 343 aaPredicted RBP12.56□□□□□ -0.4
TRAF4-208ENST00000469529 TOE1Q96GM8 510 aaKnown RBP12.56□□□□□ -0.4
TRAF4-208ENST00000469529 BMFQ96LC9 184 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 MAGEB18Q96M61 343 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 FAM111AQ96PZ2 611 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 CCM2Q9BSQ5 444 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 MRPL46Q9H2W6 279 aaKnown RBP12.56□□□□□ -0.4
TRAF4-208ENST00000469529 WDR26Q9H7D7 661 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 FAM86C1Q9NVL1 165 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 SIRPGQ9P1W8 387 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 SLC17A7Q9P2U7 560 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 SLC17A4Q9Y2C5 497 aa12.56□□□□□ -0.4
TRAF4-208ENST00000469529 ZNF106Q9H2Y7 1883 aaKnown RBP12.56□□□□□ -0.4
TRAF4-208ENST00000469529 G3V2L1 256 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 PRAMEF26H0Y7S4 382 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 FPGTO14772 594 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 TNFRSF10CO14798 259 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 RAD51BO15315 384 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 IGHV4-34P06331 123 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 BPGMP07738 259 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 CPA3P15088 417 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 CCR7P32248 378 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 MAPK9P45984 424 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 RGS4P49798 205 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 CTSCP53634 463 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 KIAA1024LP59773 190 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 PFN3P60673 137 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 PPP2CBP62714 309 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 PPP2CAP67775 309 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 IRF9Q00978 393 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 GUCY1A3Q02108 690 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 ZNF460Q14592 562 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 PDK4Q16654 411 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 CDKL4Q5MAI5 379 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 TMEM220Q6QAJ8 160 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 SLC36A4Q6YBV0 504 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 OTOAQ7RTW8 1153 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 ABI3BPQ7Z7G0 1075 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 FAM124AQ86V42 546 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 PIM3Q86V86 326 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 HEATR4Q86WZ0 1026 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 TRIM42Q8IWZ5 723 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 SIDT2Q8NBJ9 832 aaKnown RBP12.55□□□□□ -0.4
TRAF4-208ENST00000469529 GIMAP7Q8NHV1 300 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 STAG3L4Q8TBR4 150 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 FUBP1Q96AE4 644 aaKnown RBP12.55□□□□□ -0.4
TRAF4-208ENST00000469529 HHIPQ96QV1 700 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 SLC30A3Q99726 388 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 APOOQ9BUR5 198 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 ZNF358Q9NW07 568 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 ATXN10Q9UBB4 475 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 COPG2Q9UBF2 871 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 MBD1Q9UIS9 605 aaPredicted RBP12.55□□□□□ -0.4
TRAF4-208ENST00000469529 TMCO1Q9UM00 188 aa12.55□□□□□ -0.4
TRAF4-208ENST00000469529 SCN8AQ9UQD0 1980 aa12.54□□□□□ -0.4
TRAF4-208ENST00000469529 A0A1W2PPC4 97 aa12.54□□□□□ -0.4
TRAF4-208ENST00000469529 SLC5A10A0PJK1 596 aa12.54□□□□□ -0.4
TRAF4-208ENST00000469529 MGAT4DA6NG13 374 aa12.54□□□□□ -0.4
TRAF4-208ENST00000469529 IQCF5A8MTL0 148 aa12.54□□□□□ -0.4
TRAF4-208ENST00000469529 METTL12A8MUP2 240 aa12.54□□□□□ -0.4
TRAF4-208ENST00000469529 LIN7AO14910 233 aaPredicted RBP12.54□□□□□ -0.4
TRAF4-208ENST00000469529 AXIN1O15169 862 aa12.54□□□□□ -0.4
TRAF4-208ENST00000469529 INPP4BO15327 924 aa12.54□□□□□ -0.4
TRAF4-208ENST00000469529 SLC16A5O15375 505 aa12.54□□□□□ -0.4
TRAF4-208ENST00000469529 KLK8O60259 260 aa12.54□□□□□ -0.4
TRAF4-208ENST00000469529 DNAJC6O75061 913 aa12.54□□□□□ -0.4
TRAF4-208ENST00000469529 TRIM16O95361 564 aa12.54□□□□□ -0.4
TRAF4-208ENST00000469529 DCNP07585 359 aaKnown RBP12.54□□□□□ -0.4
TRAF4-208ENST00000469529 MPC1LP0DKB6 136 aa12.54□□□□□ -0.4
TRAF4-208ENST00000469529 AKT1P31749 480 aa12.54□□□□□ -0.4
TRAF4-208ENST00000469529 AKT2P31751 481 aa12.54□□□□□ -0.4
TRAF4-208ENST00000469529 IGFALSP35858 605 aa12.54□□□□□ -0.4
TRAF4-208ENST00000469529 GYS2P54840 703 aa12.54□□□□□ -0.4
TRAF4-208ENST00000469529 NAA20P61599 178 aa12.54□□□□□ -0.4
TRAF4-208ENST00000469529 RPA4Q13156 261 aa12.54□□□□□ -0.4
TRAF4-208ENST00000469529 GTF2H3Q13889 308 aa12.54□□□□□ -0.4
TRAF4-208ENST00000469529 CSHL1Q14406 222 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms