RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	TRBV23OR9-2	A0A075B6M9	112 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	IGHV1OR21-1	A0A087WYE8	117 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	PRAMEF33	A0A0G2JMD5	474 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	IGHV5-10-1	A0A0J9YXX1	117 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507		A6NCN8	305 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	RHPN2P1	A8MT19	583 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	CES2	O00748	559 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	PPM1D	O15297	605 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	ZW10	O43264	779 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	EFS	O43281	561 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	PRAMEF10	O60809	474 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	SRP72	O76094	671 aa	Known RBP	12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	ITIH1	P19827	911 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	CSF2RB	P32927	897 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	GRIA1	P42261	906 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	LIMK2	P53671	638 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	OR1D5	P58170	312 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	SEPT7	Q16181	437 aa	Known RBP	12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	LDLRAP1	Q5SW96	308 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	CCDC81	Q6ZN84	652 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	ADGRG6	Q86SQ4	1221 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	PIM3	Q86V86	326 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	LRRTM4	Q86VH4	590 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	JAML	Q86YT9	394 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	SFRP1	Q8N474	314 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	OTUD6B	Q8N6M0	293 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	ZNF398	Q8TD17	642 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	DCUN1D1	Q96GG9	259 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	DDX47	Q9H0S4	455 aa	Known RBP	12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	RMI1	Q9H9A7	625 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	RDH14	Q9HBH5	336 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	ARNT2	Q9HBZ2	717 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	TRIM39	Q9HCM9	518 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	FOXJ2	Q9P0K8	574 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	PDP2	Q9P2J9	529 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	ASIC3	Q9UHC3	531 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	PCDHGA3	Q9Y5H0	932 aa		12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	12.52	□□□□□ -0.41
FDPS-204	ENST00000461507	TLN1	Q9Y490	2541 aa	Known RBP	12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	HEATR9	A2RTY3	570 aa		12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	OR2AG2	A6NM03	316 aa		12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	PDZK1P1	A8MUH7	402 aa		12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	C9orf172	C9J069	976 aa		12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	GOLGA8M	H3BSY2	632 aa		12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	VEGFD	O43915	354 aa		12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	NUAK1	O60285	661 aa		12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	THRA	P10827	490 aa		12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	RALB	P11234	206 aa		12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	FNTA	P49354	379 aa		12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	ZNF140	P52738	457 aa	Predicted RBP	12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	GPLD1	P80108	840 aa		12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	SARNP	P82979	210 aa	Known RBP	12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	TMEM115	Q12893	351 aa	Predicted RBP	12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	TAF1B	Q53T94	588 aa	Predicted RBP	12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	PHF19	Q5T6S3	580 aa		12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	GPRC6A	Q5T6X5	926 aa		12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	SYT10	Q6XYQ8	523 aa		12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	OR4D9	Q8NGE8	314 aa		12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	SLC37A2	Q8TED4	501 aa		12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	STYX	Q8WUJ0	223 aa		12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	ULK4	Q96C45	1275 aa		12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	CCDC74B	Q96LY2	380 aa		12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	C16orf45	Q96MC5	204 aa	Predicted RBP	12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	VPS35	Q96QK1	796 aa		12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	EIF2B3	Q9NR50	452 aa	Known RBP	12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	KLC4	Q9NSK0	619 aa		12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	BFAR	Q9NZS9	450 aa		12.51	□□□□□ -0.41
FDPS-204	ENST00000461507	SPTA1	P02549	2419 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	PIEZO2	Q9H5I5	2752 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	CFAP99	D6REC4	459 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	KMO	O15229	486 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	LDB2	O43679	373 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	SUN1	O94901	812 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	PLA2G2A	P14555	144 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	VCL	P18206	1134 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	ALDH4A1	P30038	563 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	CLCNKA	P51800	687 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	PRAME	P78395	509 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	CRADD	P78560	199 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	NFATC2	Q13469	925 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	LAMB3	Q13751	1172 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	TGIF1	Q15583	401 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	SKIDA1	Q1XH10	827 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	AMZ1	Q400G9	498 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	KHDC1	Q4VXA5	237 aa	Known RBP	12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	FNBP1L	Q5T0N5	605 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	KIAA1614	Q5VZ46	1190 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	PAPD7	Q5XG87	772 aa	Known RBP	12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	CASC4	Q6P4E1	433 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	MICALCL	Q6ZW33	695 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	KLHDC8B	Q8IXV7	354 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	OR6P1	Q8NGX9	317 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	NAT14	Q8WUY8	206 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	ZNF592	Q92610	1267 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	USP7	Q93009	1102 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	SEMA4C	Q9C0C4	833 aa		12.5	□□□□□ -0.41
FDPS-204	ENST00000461507	STN1	Q9H668	368 aa	Known RBP	12.5	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms