RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 MMP28Q9H239 520 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 DUSP21Q9H596 190 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 SLC52A3Q9NQ40 469 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 KLHL8Q9P2G9 620 aaPredicted RBP12.66□□□□□ -0.38
HERC3-203ENST00000407637 RAPGEFL1Q9UHV5 662 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 TPRKBQ9Y3C4 175 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 OR2A25A4D2G3 310 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 AGRPO00253 132 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 DPYSL4O14531 572 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 RGS10O43665 173 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 CST1P01037 141 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 PRLP01236 227 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 PIGRP01833 764 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 HTR1EP28566 365 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 RYKP34925 604 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 EEFSECP57772 596 aaKnown RBP12.65□□□□□ -0.38
HERC3-203ENST00000407637 TAS2R39P59534 338 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 NKG7Q16617 165 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 SPATS1Q496A3 300 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 TECRLQ5HYJ1 363 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 OR4M2Q8NGB6 313 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 NXF2Q9GZY0 626 aaKnown RBP12.65□□□□□ -0.38
HERC3-203ENST00000407637 TMEM39AQ9NV64 488 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 PCDH10Q9P2E7 1040 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 C3orf18Q9UK00 162 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 NRCAMQ92823 1304 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 LOC100506127A0A0U1RQW1 187 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 GNGT2O14610 69 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 PIP5K1BO14986 540 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 AP2A1O95782 977 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 C1RP00736 705 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 HOXD8P13378 290 aaPredicted RBP12.65□□□□□ -0.38
HERC3-203ENST00000407637 POU3F3P20264 500 aaPredicted RBP12.65□□□□□ -0.38
HERC3-203ENST00000407637 SLC26A3P40879 764 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 IL12RB1P42701 662 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 MAP3K7CLP57077 242 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 IL1RL1Q01638 556 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 EMC2Q15006 297 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 PRSS36Q5K4E3 855 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 ENPP6Q6UWR7 440 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 BRINP3Q76B58 766 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 GALNT5Q7Z7M9 940 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 TMEM179BQ7Z7N9 219 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 FAM160B2Q86V87 743 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 FBXO30Q8TB52 745 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 FBLIM1Q8WUP2 373 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 AKT1S1Q96B36 256 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 TEX37Q96LM6 180 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 ACOX2Q99424 681 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 TM9SF2Q99805 663 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 TEX13BQ9BXU2 312 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 CASS4Q9NQ75 786 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 IGSF5Q9NSI5 407 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 USE1Q9NZ43 259 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 GLTPQ9NZD2 209 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 TMPRSS11EQ9UL52 423 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 MKLN1Q9UL63 735 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.65□□□□□ -0.38
HERC3-203ENST00000407637 AP3M1Q9Y2T2 418 aa12.65□□□□□ -0.38
HERC3-203ENST00000407637 BRCA1P38398 1863 aaKnown RBP12.64□□□□□ -0.39
HERC3-203ENST00000407637 ZNF487B1APH4 448 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 LOC110117498-PIK3R3F6TDL0 507 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 SLC9A3R1O14745 358 aaPredicted RBP12.64□□□□□ -0.39
HERC3-203ENST00000407637 MITFO75030 526 aaPredicted RBP12.64□□□□□ -0.39
HERC3-203ENST00000407637 SNX4O95219 450 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 TRAPPC2P0DI81 140 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 TRAPPC2BP0DI82 140 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 CFL1P23528 166 aaKnown RBP12.64□□□□□ -0.39
HERC3-203ENST00000407637 FAPQ12884 760 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 DSC3Q14574 896 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 BTBD16Q32M84 506 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 SWSAP1Q6NVH7 229 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 SLC38A4Q969I6 547 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 Q96MT0 163 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 TRNT1Q96Q11 434 aaKnown RBP12.64□□□□□ -0.39
HERC3-203ENST00000407637 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.64□□□□□ -0.39
HERC3-203ENST00000407637 GBA2Q9HCG7 927 aaPredicted RBP12.64□□□□□ -0.39
HERC3-203ENST00000407637 KLHL20Q9Y2M5 609 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 PCDHA10Q9Y5I2 948 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 KIAA1217Q5T5P2 1943 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 COL11A2P13942 1736 aaPredicted RBP12.64□□□□□ -0.39
HERC3-203ENST00000407637 A0A1W2PP18 115 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 INO80B-WBP1J3KQ70 363 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 ARHGEF9O43307 516 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 FAM20BO75063 409 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 CYP7B1O75881 506 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 SUPT7LO94864 414 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 CYP11A1P05108 521 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 JUNDP17535 347 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 MAPK12P53778 367 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 DIO3P55073 304 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 CDH13P55290 713 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 GJC2Q5T442 439 aaPredicted RBP12.64□□□□□ -0.39
HERC3-203ENST00000407637 PSTKQ8IV42 348 aaKnown RBP12.64□□□□□ -0.39
HERC3-203ENST00000407637 ZMIZ2Q8NF64 920 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 TMCO6Q96DC7 493 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 TOE1Q96GM8 510 aaKnown RBP12.64□□□□□ -0.39
HERC3-203ENST00000407637 TMEM80Q96HE8 168 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 TMEM176AQ96HP8 235 aa12.64□□□□□ -0.39
HERC3-203ENST00000407637 ITPAQ9BY32 194 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms