RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 CYC1P08574 325 aa5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 GNLYP22749 145 aa5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 PIGAP37287 484 aa5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 HSD17B4P51659 736 aa5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 PCLAFQ15004 111 aa5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 NTRK2Q16620 822 aa5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 SHROOM1Q2M3G4 852 aaPredicted RBP5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 ZNF284Q2VY69 593 aa5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 LRIT3Q3SXY7 679 aa5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 DCAF12L2Q5VW00 463 aa5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 PLEKHA7Q6IQ23 1121 aa5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 NAA16Q6N069 864 aaPredicted RBP5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 PQLC2Q6ZP29 291 aa5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 MTSS1LQ765P7 747 aa5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 ARFGAP1Q8N6T3 406 aa5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 IL17RCQ8NAC3 791 aa5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 LPAR1Q92633 364 aa5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 CCDC34Q96HJ3 373 aa5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 HARBI1Q96MB7 349 aa5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 ISCUQ9H1K1 167 aa5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 ESRP2Q9H6T0 727 aaKnown RBP5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 MKKSQ9NPJ1 570 aaPredicted RBP5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 SEC63Q9UGP8 760 aaKnown RBP5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 PTRH2Q9Y3E5 179 aaKnown RBP5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 SRPRBQ9Y5M8 271 aaKnown RBP5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 HS3ST3B1Q9Y662 390 aa5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 OTOFQ9HC10 1997 aa5.65□□□□□ -1.51
RNU4-39P-201ENST00000362455 GAKO14976 1311 aa5.65□□□□□ -1.51
RNU4-39P-201ENST00000362455 ZNF521Q96K83 1311 aa5.65□□□□□ -1.51
RNU4-39P-201ENST00000362455 LAMB1P07942 1786 aa5.65□□□□□ -1.51
RNU4-39P-201ENST00000362455 OR2A25A4D2G3 310 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 H3BQ06 376 aaPredicted RBP5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 I6L893 689 aaPredicted RBP5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 VCYO14598 125 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 JRKO75564 520 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 FGBP02675 491 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 PRF1P14222 555 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 CD58P19256 250 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 MMP13P45452 471 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 ZBED6P86452 979 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 ST3GAL1Q11201 340 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 SPP2Q13103 211 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 MANEAQ5SRI9 462 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 DPPA4Q7L190 304 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 MON1BQ7L1V2 547 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 MMP21Q8N119 569 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 NANOGP1Q8N7R0 232 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 ZNF548Q8NEK5 533 aaPredicted RBP5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 NTN5Q8WTR8 489 aaPredicted RBP5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 TRIB2Q92519 343 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 ACOX2Q99424 681 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 SLITRK6Q9H5Y7 841 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 CLK4Q9HAZ1 481 aaKnown RBP5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 HINT3Q9NQE9 182 aaKnown RBP5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 GIMAP4Q9NUV9 329 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 TMEM51Q9NW97 253 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 CWC15Q9P013 229 aaKnown RBP5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 PTGFRNQ9P2B2 879 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 MORF4L1Q9UBU8 362 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 AGTPBP1Q9UPW5 1226 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 PA2G4Q9UQ80 394 aaKnown RBP5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 FRMD4BQ9Y2L6 1034 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 CMAHPQ9Y471 501 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 MAGED1Q9Y5V3 778 aaPredicted RBP5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 SALL1Q9NSC2 1324 aa5.64□□□□□ -1.51
RNU4-39P-201ENST00000362455 SPEF2Q9C093 1822 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 GPR75-ASB3A0A0A6YYF3 556 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 FGF2P09038 288 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 ARSBP15848 533 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 CD38P28907 300 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 COMPP49747 757 aaPredicted RBP5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 RRP1P56182 461 aaKnown RBP5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 TAS2R40P59535 323 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 ZP1P60852 638 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 TIMM10P62072 90 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 SSBP2P81877 361 aaPredicted RBP5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 ADORA2A-AS1P86434 159 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 MYBPC2Q14324 1141 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 GPR18Q14330 331 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 NEDD9Q14511 834 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 PTGR1Q14914 329 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 RASA2Q15283 850 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 LRRC26Q2I0M4 334 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 ODF3L2Q3SX64 289 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 GARNL3Q5VVW2 1013 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 RPUSD3Q6P087 351 aaKnown RBP5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 Q6ZSV7 163 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 ZNF367Q7RTV3 350 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 KBTBD6Q86V97 674 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 TMEM199Q8N511 208 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 C7orf57Q8NEG2 295 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 PRPF31Q8WWY3 499 aaKnown RBP5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 GUCD1Q96NT3 240 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 ABHD1Q96SE0 405 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 GAD1Q99259 594 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 PCGF1Q9BSM1 259 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 SIL1Q9H173 461 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 HRH4Q9H3N8 390 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 NDST4Q9H3R1 872 aa5.63□□□□□ -1.51
RNU4-39P-201ENST00000362455 CATSPERBQ9H7T0 1116 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms