RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 CFAP99D6REC4 459 aa27.12■■□□□ 1.93
ATPAF1-201ENST00000329231 CCL22O00626 93 aa27.12■■□□□ 1.93
ATPAF1-201ENST00000329231 SLC5A2P31639 672 aa27.12■■□□□ 1.93
ATPAF1-201ENST00000329231 CXCR5P32302 372 aa27.12■■□□□ 1.93
ATPAF1-201ENST00000329231 MAPK9P45984 424 aa27.12■■□□□ 1.93
ATPAF1-201ENST00000329231 BCL7AQ4VC05 210 aa27.12■■□□□ 1.93
ATPAF1-201ENST00000329231 TMEM26Q6ZUK4 368 aa27.12■■□□□ 1.93
ATPAF1-201ENST00000329231 RBM12BQ8IXT5 1001 aaKnown RBP27.12■■□□□ 1.93
ATPAF1-201ENST00000329231 RCBTB1Q8NDN9 531 aa27.12■■□□□ 1.93
ATPAF1-201ENST00000329231 NCSTNQ92542 709 aa27.12■■□□□ 1.93
ATPAF1-201ENST00000329231 CXorf40BQ96DE9 158 aa27.12■■□□□ 1.93
ATPAF1-201ENST00000329231 COPS8Q99627 209 aa27.12■■□□□ 1.93
ATPAF1-201ENST00000329231 FAM96AQ9H5X1 160 aa27.12■■□□□ 1.93
ATPAF1-201ENST00000329231 TMEM9Q9P0T7 183 aa27.12■■□□□ 1.93
ATPAF1-201ENST00000329231 PDP2Q9P2J9 529 aa27.12■■□□□ 1.93
ATPAF1-201ENST00000329231 JRKLQ9Y4A0 524 aa27.12■■□□□ 1.93
ATPAF1-201ENST00000329231 DSPP15924 2871 aaKnown RBP27.12■■□□□ 1.93
ATPAF1-201ENST00000329231 MROH6A6NGR9 719 aa27.11■■□□□ 1.93
ATPAF1-201ENST00000329231 NVLO15381 856 aaKnown RBP27.11■■□□□ 1.93
ATPAF1-201ENST00000329231 ITIH1P19827 911 aa27.11■■□□□ 1.93
ATPAF1-201ENST00000329231 MPSTP25325 297 aa27.11■■□□□ 1.93
ATPAF1-201ENST00000329231 PBLDP30039 288 aaPredicted RBP27.11■■□□□ 1.93
ATPAF1-201ENST00000329231 TLE3Q04726 772 aa27.11■■□□□ 1.93
ATPAF1-201ENST00000329231 LAMB3Q13751 1172 aa27.11■■□□□ 1.93
ATPAF1-201ENST00000329231 SKIDA1Q1XH10 827 aa27.11■■□□□ 1.93
ATPAF1-201ENST00000329231 ZRANB3Q5FWF4 1079 aa27.11■■□□□ 1.93
ATPAF1-201ENST00000329231 BROXQ5VW32 411 aa27.11■■□□□ 1.93
ATPAF1-201ENST00000329231 C4orf22Q6V702 233 aa27.11■■□□□ 1.93
ATPAF1-201ENST00000329231 GSTA5Q7RTV2 222 aa27.11■■□□□ 1.93
ATPAF1-201ENST00000329231 PRUNE1Q86TP1 453 aa27.11■■□□□ 1.93
ATPAF1-201ENST00000329231 BEND7Q8N7W2 519 aaPredicted RBP27.11■■□□□ 1.93
ATPAF1-201ENST00000329231 AGBL5Q8NDL9 886 aa27.11■■□□□ 1.93
ATPAF1-201ENST00000329231 CDKN2AIPNLQ96HQ2 116 aa27.11■■□□□ 1.93
ATPAF1-201ENST00000329231 TBC1D10AQ9BXI6 508 aa27.11■■□□□ 1.93
ATPAF1-201ENST00000329231 WDR37Q9Y2I8 494 aa27.11■■□□□ 1.93
ATPAF1-201ENST00000329231 MGAT4DA6NG13 374 aa27.1■■□□□ 1.93
ATPAF1-201ENST00000329231 OR52A4PA6NMU1 304 aa27.1■■□□□ 1.93
ATPAF1-201ENST00000329231 CSTF2P33240 577 aaKnown RBP eCLIP27.1■■□□□ 1.93
ATPAF1-201ENST00000329231 NFE2L1Q14494 772 aa27.1■■□□□ 1.93
ATPAF1-201ENST00000329231 CLCA4Q14CN2 919 aa27.1■■□□□ 1.93
ATPAF1-201ENST00000329231 PDZD3Q86UT5 571 aa27.1■■□□□ 1.93
ATPAF1-201ENST00000329231 GLIS1Q8NBF1 620 aa27.1■■□□□ 1.93
ATPAF1-201ENST00000329231 SLC40A1Q9NP59 571 aa27.1■■□□□ 1.93
ATPAF1-201ENST00000329231 LAMA5O15230 3695 aa27.1■■□□□ 1.93
ATPAF1-201ENST00000329231 TRBV5-4A0A0C4DH59 114 aa27.09■■□□□ 1.93
ATPAF1-201ENST00000329231 HEATR9A2RTY3 570 aa27.09■■□□□ 1.93
ATPAF1-201ENST00000329231 KLK10O43240 276 aa27.09■■□□□ 1.93
ATPAF1-201ENST00000329231 APRTP07741 180 aa27.09■■□□□ 1.93
ATPAF1-201ENST00000329231 ZSCAN5DPP0CG00 497 aa27.09■■□□□ 1.93
ATPAF1-201ENST00000329231 ATP1B2P14415 290 aaPredicted RBP27.09■■□□□ 1.93
ATPAF1-201ENST00000329231 PSMA3P25788 255 aa27.09■■□□□ 1.93
ATPAF1-201ENST00000329231 RPL22P35268 128 aaKnown RBP27.09■■□□□ 1.93
ATPAF1-201ENST00000329231 ETV5P41161 510 aa27.09■■□□□ 1.93
ATPAF1-201ENST00000329231 MAPK10P53779 464 aa27.09■■□□□ 1.93
ATPAF1-201ENST00000329231 CACNG1Q06432 222 aa27.09■■□□□ 1.93
ATPAF1-201ENST00000329231 TMEM164Q5U3C3 297 aa27.09■■□□□ 1.93
ATPAF1-201ENST00000329231 METRNLQ641Q3 311 aa27.09■■□□□ 1.93
ATPAF1-201ENST00000329231 FAM83HQ6ZRV2 1179 aaPredicted RBP27.09■■□□□ 1.93
ATPAF1-201ENST00000329231 TAS2R42Q7RTR8 314 aa27.09■■□□□ 1.93
ATPAF1-201ENST00000329231 OR2L2Q8NH16 312 aa27.09■■□□□ 1.93
ATPAF1-201ENST00000329231 LINC00615Q96LM1 132 aaPredicted RBP27.09■■□□□ 1.93
ATPAF1-201ENST00000329231 B3GNT4Q9C0J1 378 aa27.09■■□□□ 1.93
ATPAF1-201ENST00000329231 ZDHHC3Q9NYG2 299 aa27.09■■□□□ 1.93
ATPAF1-201ENST00000329231 ACSL6Q9UKU0 697 aa27.09■■□□□ 1.93
ATPAF1-201ENST00000329231 ACRV1P26436 265 aa27.08■■□□□ 1.93
ATPAF1-201ENST00000329231 UCNP55089 124 aa27.08■■□□□ 1.93
ATPAF1-201ENST00000329231 CCDC38Q502W7 563 aa27.08■■□□□ 1.93
ATPAF1-201ENST00000329231 PLXDC1Q8IUK5 500 aa27.08■■□□□ 1.93
ATPAF1-201ENST00000329231 USP7Q93009 1102 aa27.08■■□□□ 1.93
ATPAF1-201ENST00000329231 PBKQ96KB5 322 aa27.08■■□□□ 1.93
ATPAF1-201ENST00000329231 CASS4Q9NQ75 786 aa27.08■■□□□ 1.93
ATPAF1-201ENST00000329231 TRMT1Q9NXH9 659 aaKnown RBP27.08■■□□□ 1.93
ATPAF1-201ENST00000329231 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.08■■□□□ 1.93
ATPAF1-201ENST00000329231 RALYQ9UKM9 306 aaKnown RBP27.08■■□□□ 1.93
ATPAF1-201ENST00000329231 ACSL5Q9ULC5 683 aa27.08■■□□□ 1.93
ATPAF1-201ENST00000329231 PSMD13Q9UNM6 376 aa27.08■■□□□ 1.93
ATPAF1-201ENST00000329231 ZFHX4Q86UP3 3567 aa27.07■■□□□ 1.92
ATPAF1-201ENST00000329231 IGLV3-16A0A075B6K0 115 aa27.07■■□□□ 1.92
ATPAF1-201ENST00000329231 SGTAO43765 313 aa27.07■■□□□ 1.92
ATPAF1-201ENST00000329231 UBXN7O94888 489 aa27.07■■□□□ 1.92
ATPAF1-201ENST00000329231 CCL4P13236 92 aa27.07■■□□□ 1.92
ATPAF1-201ENST00000329231 AMD1P17707 334 aa27.07■■□□□ 1.92
ATPAF1-201ENST00000329231 GRIA1P42261 906 aa27.07■■□□□ 1.92
ATPAF1-201ENST00000329231 PRLHRP49683 370 aa27.07■■□□□ 1.92
ATPAF1-201ENST00000329231 CDKN1CP49918 316 aaPredicted RBP27.07■■□□□ 1.92
ATPAF1-201ENST00000329231 RPE65Q16518 533 aa27.07■■□□□ 1.92
ATPAF1-201ENST00000329231 SNAP47Q5SQN1 464 aa27.07■■□□□ 1.92
ATPAF1-201ENST00000329231 SERPINA9Q86WD7 417 aa27.07■■□□□ 1.92
ATPAF1-201ENST00000329231 CRELD1Q96HD1 420 aa27.07■■□□□ 1.92
ATPAF1-201ENST00000329231 RANBP9Q96S59 729 aa27.07■■□□□ 1.92
ATPAF1-201ENST00000329231 EIF2B3Q9NR50 452 aaKnown RBP27.07■■□□□ 1.92
ATPAF1-201ENST00000329231 FAM208BQ5VWN6 2430 aa27.07■■□□□ 1.92
ATPAF1-201ENST00000329231 PRAMEF33A0A0G2JMD5 474 aa27.06■■□□□ 1.92
ATPAF1-201ENST00000329231 CCDC78A2IDD5 438 aa27.06■■□□□ 1.92
ATPAF1-201ENST00000329231 PRAMEF10O60809 474 aa27.06■■□□□ 1.92
ATPAF1-201ENST00000329231 ADRA1DP25100 572 aa27.06■■□□□ 1.92
ATPAF1-201ENST00000329231 MSNP26038 577 aaKnown RBP27.06■■□□□ 1.92
ATPAF1-201ENST00000329231 KCNJ1P48048 391 aa27.06■■□□□ 1.92
ATPAF1-201ENST00000329231 GPR18Q14330 331 aa27.06■■□□□ 1.92
ATPAF1-201ENST00000329231 ARHGAP22Q7Z5H3 698 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms