RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 CAPGP40121 348 aa17.03■□□□□ 0.32
GABRB3-202ENST00000311550 CTSKP43235 329 aa17.03■□□□□ 0.32
GABRB3-202ENST00000311550 YAP1P46937 504 aaKnown RBP17.03■□□□□ 0.32
GABRB3-202ENST00000311550 GSCP56915 257 aaPredicted RBP17.03■□□□□ 0.32
GABRB3-202ENST00000311550 PIK3C3Q8NEB9 887 aa17.03■□□□□ 0.32
GABRB3-202ENST00000311550 MCFD2Q8NI22 146 aa17.03■□□□□ 0.32
GABRB3-202ENST00000311550 CCNB1IP1Q9NPC3 277 aa17.03■□□□□ 0.32
GABRB3-202ENST00000311550 ECI2O75521 394 aa17.03■□□□□ 0.32
GABRB3-202ENST00000311550 CXCR2P25025 360 aa17.03■□□□□ 0.32
GABRB3-202ENST00000311550 SLC13A3Q8WWT9 602 aa17.03■□□□□ 0.32
GABRB3-202ENST00000311550 SLC7A6OSQ96CW6 309 aaPredicted RBP17.03■□□□□ 0.32
GABRB3-202ENST00000311550 CDKN2AIPNLQ96HQ2 116 aa17.03■□□□□ 0.32
GABRB3-202ENST00000311550 SYT11Q9BT88 431 aa17.03■□□□□ 0.32
GABRB3-202ENST00000311550 INTS10Q9NVR2 710 aaKnown RBP17.03■□□□□ 0.32
GABRB3-202ENST00000311550 OAZ3Q9UMX2 235 aa17.03■□□□□ 0.32
GABRB3-202ENST00000311550 PSMD11O00231 422 aa17.03■□□□□ 0.32
GABRB3-202ENST00000311550 ZBTB48P10074 688 aaPredicted RBP17.03■□□□□ 0.32
GABRB3-202ENST00000311550 KCNE1P15382 129 aa17.03■□□□□ 0.32
GABRB3-202ENST00000311550 CHIT1Q13231 466 aa17.03■□□□□ 0.32
GABRB3-202ENST00000311550 PTPRCAPQ14761 206 aa17.03■□□□□ 0.32
GABRB3-202ENST00000311550 PTCHD4Q6ZW05 846 aa17.03■□□□□ 0.32
GABRB3-202ENST00000311550 R3HCC1LQ7Z5L2 792 aaKnown RBP17.03■□□□□ 0.32
GABRB3-202ENST00000311550 CAPSLQ8WWF8 208 aa17.03■□□□□ 0.32
GABRB3-202ENST00000311550 MAGEB10Q96LZ2 347 aaPredicted RBP17.03■□□□□ 0.32
GABRB3-202ENST00000311550 SPRTNQ9H040 489 aaPredicted RBP17.03■□□□□ 0.32
GABRB3-202ENST00000311550 CRISPLD1Q9H336 500 aa17.03■□□□□ 0.32
GABRB3-202ENST00000311550 GKN1Q9NS71 199 aa17.03■□□□□ 0.32
GABRB3-202ENST00000311550 DOT1LQ8TEK3 1739 aa17.03■□□□□ 0.32
GABRB3-202ENST00000311550 UGT2B11O75310 529 aa17.02■□□□□ 0.32
GABRB3-202ENST00000311550 PURAQ00577 322 aaKnown RBP17.02■□□□□ 0.32
GABRB3-202ENST00000311550 PTSQ03393 145 aa17.02■□□□□ 0.32
GABRB3-202ENST00000311550 MSANTD2Q6P1R3 559 aa17.02■□□□□ 0.32
GABRB3-202ENST00000311550 AHSA2Q719I0 299 aa17.02■□□□□ 0.32
GABRB3-202ENST00000311550 LEMD2Q8NC56 503 aa17.02■□□□□ 0.32
GABRB3-202ENST00000311550 IGFLR1Q9H665 355 aa17.02■□□□□ 0.32
GABRB3-202ENST00000311550 CCSER2Q9H7U1 834 aa17.02■□□□□ 0.32
GABRB3-202ENST00000311550 BEST1O76090 585 aa17.02■□□□□ 0.32
GABRB3-202ENST00000311550 ADH1AP07327 375 aa17.02■□□□□ 0.32
GABRB3-202ENST00000311550 TNNI3P19429 210 aa17.02■□□□□ 0.32
GABRB3-202ENST00000311550 RPL3P39023 403 aaKnown RBP17.02■□□□□ 0.32
GABRB3-202ENST00000311550 KLHL17Q6TDP4 642 aa17.02■□□□□ 0.32
GABRB3-202ENST00000311550 ENDOVQ8N8Q3 282 aaKnown RBP17.02■□□□□ 0.32
GABRB3-202ENST00000311550 VANGL1Q8TAA9 524 aaPredicted RBP17.02■□□□□ 0.32
GABRB3-202ENST00000311550 MYOCQ99972 504 aa17.02■□□□□ 0.32
GABRB3-202ENST00000311550 NUSAP1Q9BXS6 441 aaKnown RBP17.02■□□□□ 0.32
GABRB3-202ENST00000311550 HIPK3Q9H422 1215 aa17.02■□□□□ 0.32
GABRB3-202ENST00000311550 ZBTB26Q9HCK0 441 aa17.02■□□□□ 0.32
GABRB3-202ENST00000311550 CXCR6O00574 342 aa17.02■□□□□ 0.32
GABRB3-202ENST00000311550 FESP07332 822 aa17.02■□□□□ 0.32
GABRB3-202ENST00000311550 BUD31P41223 144 aaPredicted RBP17.02■□□□□ 0.32
GABRB3-202ENST00000311550 UGT2B15P54855 530 aa17.02■□□□□ 0.32
GABRB3-202ENST00000311550 CACTIN-AS1Q8N1I8 211 aa17.02■□□□□ 0.32
GABRB3-202ENST00000311550 FBRSL1Q9HCM7 1045 aaKnown RBP17.02■□□□□ 0.32
GABRB3-202ENST00000311550 MIOSQ9NXC5 875 aa17.02■□□□□ 0.32
GABRB3-202ENST00000311550 GALPQ9UBC7 116 aa17.02■□□□□ 0.32
GABRB3-202ENST00000311550 MATN2O00339 956 aa17.02■□□□□ 0.31
GABRB3-202ENST00000311550 SLC9A3R1O14745 358 aaPredicted RBP17.02■□□□□ 0.31
GABRB3-202ENST00000311550 FABP3P05413 133 aa17.02■□□□□ 0.31
GABRB3-202ENST00000311550 HMGCS1Q01581 520 aa17.02■□□□□ 0.31
GABRB3-202ENST00000311550 MPPE1Q53F39 396 aa17.02■□□□□ 0.31
GABRB3-202ENST00000311550 S100ZQ8WXG8 99 aa17.02■□□□□ 0.31
GABRB3-202ENST00000311550 LRRC58Q96CX6 371 aa17.02■□□□□ 0.31
GABRB3-202ENST00000311550 CPQQ9Y646 472 aa17.02■□□□□ 0.31
GABRB3-202ENST00000311550 CBFA2T3O75081 653 aa17.02■□□□□ 0.31
GABRB3-202ENST00000311550 CDK14O94921 469 aa17.02■□□□□ 0.31
GABRB3-202ENST00000311550 CXCL14O95715 111 aa17.02■□□□□ 0.31
GABRB3-202ENST00000311550 IL6P05231 212 aa17.02■□□□□ 0.31
GABRB3-202ENST00000311550 ANXA4P09525 319 aaPredicted RBP17.02■□□□□ 0.31
GABRB3-202ENST00000311550 ALDH4A1P30038 563 aa17.02■□□□□ 0.31
GABRB3-202ENST00000311550 CCNYL2Q5T2Q4 361 aa17.02■□□□□ 0.31
GABRB3-202ENST00000311550 CCDC106Q9BWC9 280 aa17.02■□□□□ 0.31
GABRB3-202ENST00000311550 GSTK1Q9Y2Q3 226 aa17.02■□□□□ 0.31
GABRB3-202ENST00000311550 SEPT4O43236 478 aa17.01■□□□□ 0.31
GABRB3-202ENST00000311550 TULP3O75386 442 aa17.01■□□□□ 0.31
GABRB3-202ENST00000311550 MANFP55145 182 aaKnown RBP17.01■□□□□ 0.31
GABRB3-202ENST00000311550 TRAP1Q12931 704 aaKnown RBP17.01■□□□□ 0.31
GABRB3-202ENST00000311550 SUCOQ9UBS9 1254 aaKnown RBP17.01■□□□□ 0.31
GABRB3-202ENST00000311550 CCDC88AQ3V6T2 1871 aa17.01■□□□□ 0.31
GABRB3-202ENST00000311550 CDC7O00311 574 aa17.01■□□□□ 0.31
GABRB3-202ENST00000311550 ARPC2O15144 300 aa17.01■□□□□ 0.31
GABRB3-202ENST00000311550 SLC28A2O43868 658 aa17.01■□□□□ 0.31
GABRB3-202ENST00000311550 EIF2S1P05198 315 aaKnown RBP17.01■□□□□ 0.31
GABRB3-202ENST00000311550 UGT1A6P19224 532 aa17.01■□□□□ 0.31
GABRB3-202ENST00000311550 UGT1A1P22309 533 aa17.01■□□□□ 0.31
GABRB3-202ENST00000311550 UGT1A4P22310 534 aa17.01■□□□□ 0.31
GABRB3-202ENST00000311550 PPIBP23284 216 aaKnown RBP17.01■□□□□ 0.31
GABRB3-202ENST00000311550 UGT1A3P35503 534 aa17.01■□□□□ 0.31
GABRB3-202ENST00000311550 UGT1A5P35504 534 aa17.01■□□□□ 0.31
GABRB3-202ENST00000311550 ITGA1P56199 1179 aa17.01■□□□□ 0.31
GABRB3-202ENST00000311550 MERTKQ12866 999 aa17.01■□□□□ 0.31
GABRB3-202ENST00000311550 USP39Q53GS9 565 aaKnown RBP17.01■□□□□ 0.31
GABRB3-202ENST00000311550 EGFLAMQ63HQ2 1017 aa17.01■□□□□ 0.31
GABRB3-202ENST00000311550 CDC73Q6P1J9 531 aa17.01■□□□□ 0.31
GABRB3-202ENST00000311550 PDSS2Q86YH6 399 aa17.01■□□□□ 0.31
GABRB3-202ENST00000311550 WDR48Q8TAF3 677 aa17.01■□□□□ 0.31
GABRB3-202ENST00000311550 KCNA7Q96RP8 456 aa17.01■□□□□ 0.31
GABRB3-202ENST00000311550 FEM1AQ9BSK4 669 aa17.01■□□□□ 0.31
GABRB3-202ENST00000311550 MAP4K5Q9Y4K4 846 aa17.01■□□□□ 0.31
GABRB3-202ENST00000311550 A0A1W2PQ67 120 aa17.01■□□□□ 0.31
GABRB3-202ENST00000311550 H3BM21 787 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms