RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 UBTD1Q9HAC8 227 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 GDE1Q9NZC3 331 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 KLHL9Q9P2J3 617 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 KCNS2Q9ULS6 477 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 OR2W1Q9Y3N9 320 aa4.3□□□□□ -1.72
CCDC54-201ENST00000261058 MAGED1Q9Y5V3 778 aaPredicted RBP4.3□□□□□ -1.72
CCDC54-201ENST00000261058 A0A0G2JPF8 293 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 OR2M5A3KFT3 312 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 C5orf60A6NFR6 353 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 HNRNPCL3B7ZW38 293 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 TMEM189-UBE2V1I3L0A0 370 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 UBE2CO00762 179 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 PAPSS2O95340 614 aaPredicted RBP4.29□□□□□ -1.72
CCDC54-201ENST00000261058 DNTTP04053 509 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 FAM106CPP0CH98 169 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 HNRNPCL4P0DMR1 293 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 NMBRP28336 390 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 TMF1P82094 1093 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 UBE2V1Q13404 147 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 FAM98BQ52LJ0 330 aaKnown RBP4.29□□□□□ -1.72
CCDC54-201ENST00000261058 BMP2KLQ5H9B9 411 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 MFSD4BQ5TF39 518 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 ZDHHC20Q5W0Z9 365 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 ZNF324BQ6AW86 544 aaPredicted RBP4.29□□□□□ -1.72
CCDC54-201ENST00000261058 HAUS6Q7Z4H7 955 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 CEP57Q86XR8 500 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 KMT5CQ86Y97 462 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 OR10S1Q8NGN2 331 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 TAS1R2Q8TE23 839 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 SORCS1Q8WY21 1168 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 CDCA5Q96FF9 252 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 SMC6Q96SB8 1091 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 C6orf106Q9H6K1 298 aaPredicted RBP4.29□□□□□ -1.72
CCDC54-201ENST00000261058 HACL1Q9UJ83 578 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 ANAPC2Q9UJX6 822 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 IGHV4OR15-8A0A075B7B6 117 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 A0A1B0GUV1 79 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 OR5K3A6NET4 321 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 HNRNPCL2B2RXH8 293 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 TULP2O00295 520 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 DVL1O14640 695 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 SLC16A5O15375 505 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 TGFB3P10600 412 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 FGF3P11487 239 aaPredicted RBP4.29□□□□□ -1.72
CCDC54-201ENST00000261058 GM2AP17900 193 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 ISL1P61371 349 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 COG7P83436 770 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 PPP2R2BQ00005 443 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 ADALQ6DHV7 355 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 SLC30A6Q6NXT4 461 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 DENND5BQ6ZUT9 1274 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 MEPCEQ7L2J0 689 aaKnown RBP4.29□□□□□ -1.72
CCDC54-201ENST00000261058 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.29□□□□□ -1.72
CCDC54-201ENST00000261058 AVL9Q8NBF6 648 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 TMEM255BQ8WV15 326 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 NAF1Q96HR8 494 aaKnown RBP4.29□□□□□ -1.72
CCDC54-201ENST00000261058 FAM84BQ96KN1 310 aaPredicted RBP4.29□□□□□ -1.72
CCDC54-201ENST00000261058 DGAT2Q96PD7 388 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 DUX5Q96PT3 197 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 NEK1Q96PY6 1258 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 TAS2R14Q9NYV8 317 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 CPSF2Q9P2I0 782 aaKnown RBP4.29□□□□□ -1.72
CCDC54-201ENST00000261058 PCDHGA5Q9Y5G8 931 aa4.29□□□□□ -1.72
CCDC54-201ENST00000261058 IGKV2D-30A0A075B6S6 120 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 TCRBV21S2A2A0A5A6 115 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 ANKRD66B4E2M5 251 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 ZNHIT1O43257 154 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 BUD23O43709 281 aaKnown RBP4.28□□□□□ -1.72
CCDC54-201ENST00000261058 WDR1O75083 606 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 EEF1A1P68104 462 aaKnown RBP4.28□□□□□ -1.72
CCDC54-201ENST00000261058 CALD1Q05682 793 aaKnown RBP4.28□□□□□ -1.72
CCDC54-201ENST00000261058 GTF2H2Q13888 395 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 MELKQ14680 651 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 ERMARDQ5T6L9 678 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 EEF1A1P5Q5VTE0 462 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 GTF2H2CQ6P1K8 395 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 TUBA1AQ71U36 451 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 C1orf52Q8N6N3 182 aaKnown RBP4.28□□□□□ -1.72
CCDC54-201ENST00000261058 OR52I2Q8NH67 350 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 BBS10Q8TAM1 723 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 TBC1D16Q8TBP0 767 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 LPGAT1Q92604 370 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 ARSGQ96EG1 525 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 IL17FQ96PD4 163 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 CDRT15Q96T59 188 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 TUBA1CQ9BQE3 449 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 NEURL2Q9BR09 285 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 APOL6Q9BWW8 343 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 C1QTNF4Q9BXJ3 329 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 KLHL4Q9C0H6 718 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 SLC35C2Q9NQQ7 365 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 TCP11L1Q9NUJ3 509 aa4.28□□□□□ -1.72
CCDC54-201ENST00000261058 hCG_1809904A0A1W2PP81 198 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 A0A1W2PPE2 198 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 A0A1W2PR64 198 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 TMEM178BH3BS89 294 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 PLK4O00444 970 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 TO15178 435 aa4.27□□□□□ -1.73
CCDC54-201ENST00000261058 EIF3DO15371 548 aaKnown RBP eCLIP4.27□□□□□ -1.73
CCDC54-201ENST00000261058 TOMM70O94826 608 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms