RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 SMOC2Q9H3U7 446 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 USE1Q9NZ43 259 aa17.5■□□□□ 0.39
CDKN1B-201ENST00000228872 SMIM35A0A1B0GVV1 85 aa17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 NOTOA8MTQ0 251 aa17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 XPNPEP2O43895 674 aa17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 WISP3O95389 354 aaPredicted RBP17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 CCDC159P0C7I6 412 aa17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 MAP2K4P45985 399 aa17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 NSUN5Q96P11 429 aaKnown RBP17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 EMILIN2Q9BXX0 1053 aa17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 ASPSCR1Q9BZE9 553 aa17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 AIG1Q9NVV5 245 aa17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 GINS2Q9Y248 185 aa17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 RALGAPA2Q2PPJ7 1873 aa17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 FNDC1Q4ZHG4 1894 aaPredicted RBP17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 SYCE1LA8MT33 242 aa17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 ANXA6P08133 673 aa17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 HOXD11P31277 338 aaPredicted RBP17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 UFM1P61960 85 aa17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 NKX3-2P78367 333 aa17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 SP3Q02447 781 aa17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 ZNF691Q5VV52 312 aa17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 HEATR4Q86WZ0 1026 aa17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 MCOLN3Q8TDD5 553 aa17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 PPP1R13LQ8WUF5 828 aa17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 ISG20Q96AZ6 181 aaKnown RBP17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 CARS2Q9HA77 564 aaKnown RBP17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 ERVK-18Q9QC07 812 aa17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 TRIP12Q14669 1992 aaPredicted RBP17.49■□□□□ 0.39
CDKN1B-201ENST00000228872 SHROOM3Q8TF72 1996 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 LOC100130705A0A1B0GUX0 176 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 ANXA9O76027 345 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 CYBBP04839 570 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 CXCR2P25025 360 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 AIF1P55008 147 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 CDKN2DP55273 166 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 BEX3Q00994 111 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 PRKCZQ05513 592 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 FAM209AQ5JX71 171 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 STEAP3Q658P3 488 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 SPATA19Q7Z5L4 167 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 FCRL5Q96RD9 977 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 CENPBD1B2RD01 187 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 CNTN5O94779 1100 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 CD6P30203 668 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 ADRA1AP35348 466 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 SEPHS1P49903 392 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 PURAQ00577 322 aaKnown RBP17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 VAC14Q08AM6 782 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 ZNF181Q2M3W8 571 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 PIM3Q86V86 326 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 SVOPQ8N4V2 548 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 CNIH3Q8TBE1 160 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 SH3RF2Q8TEC5 729 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 ZNF566Q969W8 418 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 ZNF419Q96HQ0 510 aaPredicted RBP17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 PLEKHA5Q9HAU0 1116 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 POLR3BQ9NW08 1133 aaPredicted RBP17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 DNAJB9Q9UBS3 223 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 EVLQ9UI08 416 aaPredicted RBP17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 FBXW11Q9UKB1 542 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 PCDHGA3Q9Y5H0 932 aa17.48■□□□□ 0.39
CDKN1B-201ENST00000228872 TBX1O43435 398 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 VPS4BO75351 444 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 MZF1P28698 734 aaPredicted RBP17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 HOXC8P31273 242 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 MRPL19P49406 292 aaKnown RBP17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 ARHGAP36Q6ZRI8 547 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 DCP2Q8IU60 420 aaKnown RBP17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 HID1Q8IV36 788 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 FAM86B1Q8N7N1 296 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 CHAC2Q8WUX2 184 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 RBM4BQ9BQ04 359 aaKnown RBP17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 C17orf80Q9BSJ5 609 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 RBM4Q9BWF3 364 aaKnown RBP17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 FAM49AQ9H0Q0 323 aaPredicted RBP17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 GLOD4Q9HC38 313 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 COMMD8Q9NX08 183 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 TMA7Q9Y2S6 64 aaKnown RBP17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 PCDHGA10Q9Y5H3 936 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 SCN10AQ9Y5Y9 1956 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 FAM172BPA6NC97 362 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 HOXC11O43248 304 aaPredicted RBP17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 SLC22A3O75751 556 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 FYNP06241 537 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 POLR2EP19388 210 aaKnown RBP17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 POLR2JP52435 117 aaKnown RBP17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 CDK5R2Q13319 367 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 E2F2Q14209 437 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 SELPLGQ14242 412 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 PPP2R2DQ66LE6 453 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 DESI1Q6ICB0 168 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 KDELC2Q7Z4H8 507 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 LRRC52Q8N7C0 313 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 OR7G1Q8NGA0 311 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 C18orf25Q96B23 403 aaPredicted RBP17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 ATXN3LQ9H3M9 355 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 OSGIN1Q9UJX0 560 aa17.47■□□□□ 0.39
CDKN1B-201ENST00000228872 UGT2A1Q9Y4X1 527 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms