RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 ATP6V1E1P36543 226 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 ACVRL1P37023 503 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 LIMK1P53667 647 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 INHBCP55103 352 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 NHLH1Q02575 133 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 COL10A1Q03692 680 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 MELKQ14680 651 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 MORF4L2Q15014 288 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 KLHL26Q53HC5 615 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 LINC00696Q6ZRV3 163 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 GET4Q7L5D6 327 aaPredicted RBP5.02□□□□□ -1.61
LINC00397-202ENST00000606785 DET1Q7L5Y6 550 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 TRAPPC11Q7Z392 1133 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 ZC3HC1Q86WB0 502 aaKnown RBP5.02□□□□□ -1.61
LINC00397-202ENST00000606785 PCDH20Q8N6Y1 951 aaKnown RBP5.02□□□□□ -1.61
LINC00397-202ENST00000606785 EMC1Q8N766 993 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 SLC4A11Q8NBS3 891 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 SPC24Q8NBT2 197 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 ATL1Q8WXF7 558 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 EXT2Q93063 718 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 RHBDF1Q96CC6 855 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 TRIM44Q96DX7 344 aaPredicted RBP5.02□□□□□ -1.61
LINC00397-202ENST00000606785 CCDC43Q96MW1 224 aaKnown RBP5.02□□□□□ -1.61
LINC00397-202ENST00000606785 LRFN5Q96NI6 719 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 INTS14Q96SY0 518 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 OLFM1Q99784 485 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 SEMA3CQ99985 751 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 QTRT1Q9BXR0 403 aaKnown RBP5.02□□□□□ -1.61
LINC00397-202ENST00000606785 MOV10L1Q9BXT6 1211 aaKnown RBP5.02□□□□□ -1.61
LINC00397-202ENST00000606785 PRSS22Q9GZN4 317 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 ISCUQ9H1K1 167 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 MMADHCQ9H3L0 296 aaPredicted RBP5.02□□□□□ -1.61
LINC00397-202ENST00000606785 C17orf75Q9HAS0 396 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 ADPRHL2Q9NX46 363 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 ACAD8Q9UKU7 415 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 B3GALT5Q9Y2C3 310 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 DMRT1Q9Y5R6 373 aa5.02□□□□□ -1.61
LINC00397-202ENST00000606785 IGSF1Q8N6C5 1336 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 FAM90A26D6RGX4 464 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 TRIM77I1YAP6 450 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 J3QR06 171 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 SOX30O94993 753 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 DANCRP0C864 163 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 CYP19A1P11511 503 aaPredicted RBP5.01□□□□□ -1.61
LINC00397-202ENST00000606785 ARSBP15848 533 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 EEF1B2P24534 225 aaKnown RBP5.01□□□□□ -1.61
LINC00397-202ENST00000606785 STX2P32856 288 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 ALDH7A1P49419 539 aaKnown RBP5.01□□□□□ -1.61
LINC00397-202ENST00000606785 NAGLUP54802 743 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 HNRNPH2P55795 449 aaKnown RBP5.01□□□□□ -1.61
LINC00397-202ENST00000606785 TAS2R38P59533 333 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 SNRPEP62304 92 aaKnown RBP5.01□□□□□ -1.61
LINC00397-202ENST00000606785 CDK3Q00526 305 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 MZT1Q08AG7 82 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 GPR18Q14330 331 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 NR1D2Q14995 579 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 SMU1Q2TAY7 513 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 LEXMQ3ZCV2 418 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 WASHC2DQ5SRD0 308 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 C10orf25Q5T742 122 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 STRIP1Q5VSL9 837 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 SFMBT2Q5VUG0 894 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 SLC18B1Q6NT16 456 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 FIGLAQ6QHK4 219 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 MOXD1Q6UVY6 613 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 ZBTB49Q6ZSB9 765 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 Q6ZSV7 163 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 ZNF534Q76KX8 674 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 ZNF367Q7RTV3 350 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 C10orf53Q8N6V4 93 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 MIGA1Q8NAN2 632 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 ATAD1Q8NBU5 361 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 BBS10Q8TAM1 723 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 MPLKIPQ8TAP9 179 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 SNX21Q969T3 373 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 SPSB1Q96BD6 273 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 ERLEC1Q96DZ1 483 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 CDHR1Q96JP9 859 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 SLC22A12Q96S37 553 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 KXD1Q9BQD3 176 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 TRMOQ9BU70 441 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 MMTAG2Q9BU76 263 aaKnown RBP5.01□□□□□ -1.61
LINC00397-202ENST00000606785 FZD8Q9H461 694 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 KRCC1Q9NPI7 259 aaPredicted RBP5.01□□□□□ -1.61
LINC00397-202ENST00000606785 ADARB2Q9NS39 739 aaKnown RBP5.01□□□□□ -1.61
LINC00397-202ENST00000606785 CWC25Q9NXE8 425 aaPredicted RBP5.01□□□□□ -1.61
LINC00397-202ENST00000606785 TINAGQ9UJW2 476 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 KCNK7Q9Y2U2 307 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 GPRASP1Q5JY77 1395 aa5.01□□□□□ -1.61
LINC00397-202ENST00000606785 TMEM272A0A1B0GTI8 110 aa5□□□□□ -1.61
LINC00397-202ENST00000606785 TMEM189-UBE2V1I3L0A0 370 aa5□□□□□ -1.61
LINC00397-202ENST00000606785 IFIT3O14879 490 aaKnown RBP5□□□□□ -1.61
LINC00397-202ENST00000606785 ANKRD28O15084 1053 aa5□□□□□ -1.61
LINC00397-202ENST00000606785 SLC16A5O15375 505 aa5□□□□□ -1.61
LINC00397-202ENST00000606785 ZBTB43O43298 467 aa5□□□□□ -1.61
LINC00397-202ENST00000606785 SSX4O60224 188 aa5□□□□□ -1.61
LINC00397-202ENST00000606785 TSPAN1O60635 241 aa5□□□□□ -1.61
LINC00397-202ENST00000606785 NDUFB8O95169 186 aa5□□□□□ -1.61
LINC00397-202ENST00000606785 EPN2O95208 641 aa5□□□□□ -1.61
LINC00397-202ENST00000606785 NAGAP17050 411 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms