RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 SLC19A1P41440 591 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 CXADRP78310 365 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 VAC14Q08AM6 782 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 DMPKQ09013 629 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 PTPRCAPQ14761 206 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 GPRC6AQ5T6X5 926 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 ZNF662Q6ZS27 426 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 ARHGAP22Q7Z5H3 698 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 AMZ2Q86W34 360 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 ZNF761Q86XN6 746 aaPredicted RBP10.35□□□□□ -0.75
CCDC9-203ENST00000596938 TRAPPC5Q8IUR0 188 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 RBM12BQ8IXT5 1001 aaKnown RBP10.35□□□□□ -0.75
CCDC9-203ENST00000596938 RASGEF1AQ8N9B8 481 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 RCBTB1Q8NDN9 531 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 OR4K2Q8NGD2 314 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 NCSTNQ92542 709 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 USP7Q93009 1102 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 RTP4Q96DX8 246 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 TAAR9Q96RI9 348 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 TBL1YQ9BQ87 522 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 APOL2Q9BQE5 337 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 FRMD8P1Q9BZ68 369 aaPredicted RBP10.35□□□□□ -0.75
CCDC9-203ENST00000596938 OSGEPL1Q9H4B0 414 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 SLC40A1Q9NP59 571 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.35□□□□□ -0.75
CCDC9-203ENST00000596938 SCHIP1Q9P0W5 487 aaPredicted RBP10.35□□□□□ -0.75
CCDC9-203ENST00000596938 ZNF624Q9P2J8 865 aaPredicted RBP10.35□□□□□ -0.75
CCDC9-203ENST00000596938 R3HDM2Q9Y2K5 976 aaKnown RBP10.35□□□□□ -0.75
CCDC9-203ENST00000596938 MGAQ8IWI9 3026 aa10.35□□□□□ -0.75
CCDC9-203ENST00000596938 PRAMEF33A0A0G2JMD5 474 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 TCRBV7S2A1N4TA0A589 114 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 PDZK1P1A8MUH7 402 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 B4E171 279 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.34□□□□□ -0.75
CCDC9-203ENST00000596938 K7ENP7 123 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 TK2O00142 265 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 LDB2O43679 373 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 PRAMEF10O60809 474 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 SRP72O76094 671 aaKnown RBP10.34□□□□□ -0.75
CCDC9-203ENST00000596938 PRAMEF1O95521 474 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 METTL18O95568 372 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 VIPP01282 170 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 BRAFP15056 766 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 MPSTP25325 297 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 HADHAP40939 763 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 TSPAN7P41732 249 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 MAPK10P53779 464 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 XIAPP98170 497 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 OLIG2Q13516 323 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 LONRF2Q1L5Z9 754 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 P3H1Q32P28 736 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 INO80CQ6PI98 192 aaPredicted RBP10.34□□□□□ -0.75
CCDC9-203ENST00000596938 TMEM220Q6QAJ8 160 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 ARHGEF18Q6ZSZ5 1173 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 TMEM26Q6ZUK4 368 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 DTX1Q86Y01 620 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 PLXDC1Q8IUK5 500 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 CCDC112Q8NEF3 446 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 BBC3Q96PG8 261 aaPredicted RBP10.34□□□□□ -0.75
CCDC9-203ENST00000596938 CCNL2Q96S94 520 aaPredicted RBP10.34□□□□□ -0.75
CCDC9-203ENST00000596938 TMEM121Q9BTD3 319 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 ASPSCR1Q9BZE9 553 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 ASB8Q9H765 288 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 LRRC40Q9H9A6 602 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 CPNE5Q9HCH3 593 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 POT1Q9NUX5 634 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 TMEM9Q9P0T7 183 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 GUCA1BQ9UMX6 200 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 DNAJC16Q9Y2G8 782 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 KCTD3Q9Y597 815 aa10.34□□□□□ -0.75
CCDC9-203ENST00000596938 KALRNO60229 2985 aa10.33□□□□□ -0.76
CCDC9-203ENST00000596938 ATXN7O15265 892 aaPredicted RBP10.33□□□□□ -0.76
CCDC9-203ENST00000596938 TOX3O15405 576 aaPredicted RBP10.33□□□□□ -0.76
CCDC9-203ENST00000596938 GPR39O43194 453 aa10.33□□□□□ -0.76
CCDC9-203ENST00000596938 EFSO43281 561 aa10.33□□□□□ -0.76
CCDC9-203ENST00000596938 LIASO43766 372 aa10.33□□□□□ -0.76
CCDC9-203ENST00000596938 AP2A1O95782 977 aa10.33□□□□□ -0.76
CCDC9-203ENST00000596938 LIPCP11150 499 aa10.33□□□□□ -0.76
CCDC9-203ENST00000596938 MSH3P20585 1137 aa10.33□□□□□ -0.76
CCDC9-203ENST00000596938 PSMA3P25788 255 aa10.33□□□□□ -0.76
CCDC9-203ENST00000596938 RPL10P27635 214 aaKnown RBP10.33□□□□□ -0.76
CCDC9-203ENST00000596938 HALP42357 657 aa10.33□□□□□ -0.76
CCDC9-203ENST00000596938 ZNF140P52738 457 aaPredicted RBP10.33□□□□□ -0.76
CCDC9-203ENST00000596938 CTSCP53634 463 aa10.33□□□□□ -0.76
CCDC9-203ENST00000596938 GDF10P55107 478 aa10.33□□□□□ -0.76
CCDC9-203ENST00000596938 MC2RQ01718 297 aa10.33□□□□□ -0.76
CCDC9-203ENST00000596938 RHDQ02161 417 aa10.33□□□□□ -0.76
CCDC9-203ENST00000596938 SPARCL1Q14515 664 aa10.33□□□□□ -0.76
CCDC9-203ENST00000596938 CLCA4Q14CN2 919 aa10.33□□□□□ -0.76
CCDC9-203ENST00000596938 PLA2G4EQ3MJ16 856 aa10.33□□□□□ -0.76
CCDC9-203ENST00000596938 GPR33Q49SQ1 333 aa10.33□□□□□ -0.76
CCDC9-203ENST00000596938 ARHGAP40Q5TG30 622 aa10.33□□□□□ -0.76
CCDC9-203ENST00000596938 MEI1Q5TIA1 1274 aa10.33□□□□□ -0.76
CCDC9-203ENST00000596938 METRNLQ641Q3 311 aa10.33□□□□□ -0.76
CCDC9-203ENST00000596938 CCDC81Q6ZN84 652 aa10.33□□□□□ -0.76
CCDC9-203ENST00000596938 SLC13A5Q86YT5 568 aaPredicted RBP10.33□□□□□ -0.76
CCDC9-203ENST00000596938 LRRC8AQ8IWT6 810 aa10.33□□□□□ -0.76
CCDC9-203ENST00000596938 TRIM48Q8IWZ4 208 aa10.33□□□□□ -0.76
CCDC9-203ENST00000596938 BEND7Q8N7W2 519 aaPredicted RBP10.33□□□□□ -0.76
CCDC9-203ENST00000596938 HEXDCQ8WVB3 486 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms