RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 DCXO43602 365 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 PI15O43692 258 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 LILRB5O75023 590 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 DNAJC6O75061 913 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 TSPAN12O95859 305 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 PROCP04070 461 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 IGHV4-34P06331 123 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 LTA4HP09960 611 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 OR56A5P0C7T3 313 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 RALBP11234 206 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 CHRM3P20309 590 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 CD6P30203 668 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 AKT1P31749 480 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 CXCL12P48061 93 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 PRLHRP49683 370 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 CTSCP53634 463 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 CDK3Q00526 305 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 PPARDQ03181 441 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 TMEM115Q12893 351 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 PDAP1Q13442 181 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 GBX1Q14549 363 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 TSNAXIP1Q2TAA8 658 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 BCL7AQ4VC05 210 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 KIAA0895LQ68EN5 471 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 UGT3A1Q6NUS8 523 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 C16orf46Q6P387 395 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 TBC1D1Q86TI0 1168 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 HEATR4Q86WZ0 1026 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 TMEM151AQ8N4L1 468 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 INPP5DQ92835 1189 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 FAM111AQ96PZ2 611 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 C6orf106Q9H6K1 298 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 SYTL2Q9HCH5 934 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 TRIM39Q9HCM9 518 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 SPATS2LQ9NUQ6 558 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 INTS9Q9NV88 658 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 TRMT6Q9UJA5 497 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 ADAM21Q9UKJ8 722 aa14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 RUVBL2Q9Y230 463 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-211ENST00000595945 THADAQ6YHU6 1953 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 TARM1B6A8C7 271 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 E5RI56 91 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 VEGFDO43915 354 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 HOXC4P09017 264 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 SBK3P0C264 359 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 CCDC166P0CW27 439 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 CD1DP15813 335 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 AOC1P19801 751 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 MAT2AP31153 395 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 HOXA6P31267 233 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 CCR3P51677 355 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 GUCY1A3Q02108 690 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 CSHL1Q14406 222 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 INPP5AQ14642 412 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 CCDC153Q494R4 210 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 ZNF658BQ4V348 819 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 LVRNQ6Q4G3 990 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 TRIM74Q86UV6 250 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 NKAPQ8N5F7 415 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 MGARPQ8TDB4 240 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 FUBP1Q96AE4 644 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 FAM136AQ96C01 138 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 SGF29Q96ES7 293 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 PDLIM5Q96HC4 596 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 PANX3Q96QZ0 392 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 TPSD1Q9BZJ3 242 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 ZCCHC2Q9C0B9 1178 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 DERL2Q9GZP9 239 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 IQCGQ9H095 443 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 OR2AG1Q9H205 316 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 MLXIPLQ9NP71 852 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 ATXN10Q9UBB4 475 aa14.53□□□□□ -0.08
SHKBP1-211ENST00000595945 F8W8V4 182 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 SLC31A1O15431 190 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 MAGEC1O60732 1142 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 TRIM16O95361 564 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 ZNF8P17098 575 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 ITGB6P18564 788 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 AOAHP28039 575 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 CCR7P32248 378 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 NUDT1P36639 197 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 ACAP2Q15057 778 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 FAM83EQ2M2I3 478 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 TECRLQ5HYJ1 363 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 AGAP9Q5VTM2 703 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 HHATQ5VTY9 493 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 LRRC8EQ6NSJ5 796 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 DET1Q7L5Y6 550 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 SPATA6LQ8N4H0 392 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 ZBTB2Q8N680 514 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 ARMC2Q8NEN0 867 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 CKAP2Q8WWK9 683 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 ZNF514Q96K75 400 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 TSNARE1Q96NA8 513 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 LGR4Q9BXB1 951 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 PCED1AQ9H1Q7 454 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 CCDC134Q9H6E4 229 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 WDR26Q9H7D7 661 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 EBF2Q9HAK2 575 aa14.52□□□□□ -0.09
SHKBP1-211ENST00000595945 NMRAL1Q9HBL8 299 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms