RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 A8MU76 341 aa17.31■□□□□ 0.36
SHKBP1-203ENST00000594298 ANKRD66B4E2M5 251 aa17.31■□□□□ 0.36
SHKBP1-203ENST00000594298 ACP5P13686 325 aa17.31■□□□□ 0.36
SHKBP1-203ENST00000594298 CLCNKAP51800 687 aa17.31■□□□□ 0.36
SHKBP1-203ENST00000594298 CRTC2Q53ET0 693 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-203ENST00000594298 SNAP47Q5SQN1 464 aa17.31■□□□□ 0.36
SHKBP1-203ENST00000594298 ZNF567Q8N184 647 aa17.31■□□□□ 0.36
SHKBP1-203ENST00000594298 PPP1R2P1Q96PQ5 205 aa17.31■□□□□ 0.36
SHKBP1-203ENST00000594298 FCRL5Q96RD9 977 aa17.31■□□□□ 0.36
SHKBP1-203ENST00000594298 FRMD8P1Q9BZ68 369 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-203ENST00000594298 CARD9Q9H257 536 aa17.31■□□□□ 0.36
SHKBP1-203ENST00000594298 TRIT1Q9H3H1 467 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-203ENST00000594298 PKD2L2Q9NZM6 624 aa17.31■□□□□ 0.36
SHKBP1-203ENST00000594298 KCNK6Q9Y257 313 aa17.31■□□□□ 0.36
SHKBP1-203ENST00000594298 MN1Q10571 1320 aaPredicted RBP17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 LOC101059948A0A1B0GTJ6 334 aa17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 NKX2-8O15522 239 aa17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 NUAK1O60285 661 aa17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 STK17BO94768 372 aa17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 ANKRD34CP0C6C1 535 aa17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 NFKB1P19838 968 aa17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 PPM1FP49593 454 aaPredicted RBP17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 CDC20Q12834 499 aa17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 MAP7Q14244 749 aa17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 PRPSAP1Q14558 356 aa17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 GSE1Q14687 1217 aa17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 QPCTQ16769 361 aa17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 COLEC12Q5KU26 742 aa17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 TIPARPQ7Z3E1 657 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 PTRH1Q86Y79 214 aaKnown RBP17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 CCHCR1Q8TD31 782 aa17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 TADA1Q96BN2 335 aa17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 PDLIM2Q96JY6 352 aa17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 CTRCQ99895 268 aa17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 UCK1Q9HA47 277 aa17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 CPNE7Q9UBL6 633 aa17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 RSPH14Q9UHP6 348 aa17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 ANAPC2Q9UJX6 822 aa17.3■□□□□ 0.36
SHKBP1-203ENST00000594298 UBR5O95071 2799 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 LILRA5A6NI73 299 aa17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 GPR89AB7ZAQ6 455 aa17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 KCNN4O15554 427 aa17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 GRID2O43424 1007 aa17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 PMPCBO75439 489 aa17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 ANXA9O76027 345 aa17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 NDST3O95803 873 aa17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 DLGAP3O95886 979 aa17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 EPOP01588 193 aa17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 GPR89BP0CG08 455 aa17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 MSNP26038 577 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 CD68P34810 354 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 CASRP41180 1078 aa17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 UBE2IP63279 158 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 KLF1Q13351 362 aaPredicted RBP17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 MPP3Q13368 585 aa17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 PCSK7Q16549 785 aa17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 PLXDC1Q8IUK5 500 aa17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 PHYKPLQ8IUZ5 450 aa17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 SPATA22Q8NHS9 363 aa17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 MAIP1Q8WWC4 291 aa17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 LRRC45Q96CN5 670 aa17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 EPN3Q9H201 632 aa17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 APMAPQ9HDC9 416 aa17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 SIDT1Q9NXL6 827 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 TLN1Q9Y490 2541 aaKnown RBP17.29■□□□□ 0.36
SHKBP1-203ENST00000594298 SPTA1P02549 2419 aa17.28■□□□□ 0.36
SHKBP1-203ENST00000594298 POLR1CO15160 346 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-203ENST00000594298 SNX2O60749 519 aa17.28■□□□□ 0.36
SHKBP1-203ENST00000594298 MT-CYBP00156 380 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-203ENST00000594298 ZNF8P17098 575 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-203ENST00000594298 GEMP55040 296 aa17.28■□□□□ 0.36
SHKBP1-203ENST00000594298 MC1RQ01726 317 aa17.28■□□□□ 0.36
SHKBP1-203ENST00000594298 SRSF1Q07955 248 aaKnown RBP eCLIP17.28■□□□□ 0.36
SHKBP1-203ENST00000594298 ANKRD20A2Q5SQ80 823 aa17.28■□□□□ 0.36
SHKBP1-203ENST00000594298 ANKRD20A1Q5TYW2 823 aa17.28■□□□□ 0.36
SHKBP1-203ENST00000594298 ANKRD20A3Q5VUR7 823 aa17.28■□□□□ 0.36
SHKBP1-203ENST00000594298 KDELC2Q7Z4H8 507 aa17.28■□□□□ 0.36
SHKBP1-203ENST00000594298 SLC13A5Q86YT5 568 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-203ENST00000594298 EID2BQ96D98 161 aa17.28■□□□□ 0.36
SHKBP1-203ENST00000594298 TRIB3Q96RU7 358 aa17.28■□□□□ 0.36
SHKBP1-203ENST00000594298 TBC1D10AQ9BXI6 508 aa17.28■□□□□ 0.36
SHKBP1-203ENST00000594298 GBA3Q9H227 469 aa17.28■□□□□ 0.36
SHKBP1-203ENST00000594298 MAGEE1Q9HCI5 957 aa17.28■□□□□ 0.36
SHKBP1-203ENST00000594298 RAD18Q9NS91 495 aa17.28■□□□□ 0.36
SHKBP1-203ENST00000594298 ATXN10Q9UBB4 475 aa17.28■□□□□ 0.36
SHKBP1-203ENST00000594298 AAR2Q9Y312 384 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-203ENST00000594298 C5orf60A6NFR6 353 aa17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 C9P02748 559 aa17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 PRKAR1AP10644 381 aa17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 XRCC1P18887 633 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 OAS2P29728 719 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 STAT5AP42229 794 aa17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 MAPK9P45984 424 aa17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 WNT3AP56704 352 aa17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 DCDC1P59894 354 aa17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 GALNT3Q14435 633 aa17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 SKIDA1Q1XH10 827 aa17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 UNC5BQ8IZJ1 945 aa17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 ESX1Q8N693 406 aa17.27■□□□□ 0.36
SHKBP1-203ENST00000594298 C9orf43Q8TAL5 461 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms