RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 CRLS1Q9UJA2 301 aa16.37■□□□□ 0.21
SREBF1-219ENST00000580540 CELSR3Q9NYQ7 3312 aa16.37■□□□□ 0.21
SREBF1-219ENST00000580540 CFAP47Q6ZTR5 3102 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 IGHV5-10-1A0A0J9YXX1 117 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 CCDC78A2IDD5 438 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 GOLGA6L3A6NEY3 463 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 E7EVH7 732 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 KLK10O43240 276 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 DUX1O43812 170 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 CEP104O60308 925 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 AP2A1O95782 977 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 ITGA2BP08514 1039 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 CSF2RBP32927 897 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 GPLD1P80108 840 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 MSLNQ13421 630 aaPredicted RBP16.36■□□□□ 0.21
SREBF1-219ENST00000580540 C16orf72Q14CZ0 275 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 OASLQ15646 514 aaKnown RBP16.36■□□□□ 0.21
SREBF1-219ENST00000580540 CLPPQ16740 277 aaPredicted RBP16.36■□□□□ 0.21
SREBF1-219ENST00000580540 LONRF2Q1L5Z9 754 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 FNBP1LQ5T0N5 605 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 IGF2-ASQ6U949 168 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 PDZD3Q86UT5 571 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 AMZ2Q86W34 360 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 CCDC89Q8N998 374 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 NAT14Q8WUY8 206 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 NCSTNQ92542 709 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 SGF29Q96ES7 293 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 DCUN1D1Q96GG9 259 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 DNAJC1Q96KC8 554 aaKnown RBP16.36■□□□□ 0.21
SREBF1-219ENST00000580540 TBC1D10AQ9BXI6 508 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.36■□□□□ 0.21
SREBF1-219ENST00000580540 ETNK1Q9HBU6 452 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 TMEM9Q9P0T7 183 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 FAM8A1Q9UBU6 413 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 SLC30A1Q9Y6M5 507 aa16.36■□□□□ 0.21
SREBF1-219ENST00000580540 LAMA5O15230 3695 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 A8MU76 341 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 CDRT15L2A8MXV6 281 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 LDB2O43679 373 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 FGGP02679 453 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 ITGALP20701 1170 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 SLC5A2P31639 672 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 MC4RP32245 332 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 CXCR5P32302 372 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 HADHAP40939 763 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 ETV5P41161 510 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 SLC19A1P41440 591 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 MLLT3P42568 568 aaPredicted RBP16.35■□□□□ 0.21
SREBF1-219ENST00000580540 ZNF140P52738 457 aaPredicted RBP16.35■□□□□ 0.21
SREBF1-219ENST00000580540 LIMK2P53671 638 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 XIAPP98170 497 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 CFHR1Q03591 330 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 ZRANB3Q5FWF4 1079 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 TMEM71Q6P5X7 295 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 PPP1R21Q6ZMI0 780 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 C11orf96Q7Z7L8 435 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 KLHDC8BQ8IXV7 354 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 BEND7Q8N7W2 519 aaPredicted RBP16.35■□□□□ 0.21
SREBF1-219ENST00000580540 DNAAF3Q8N9W5 541 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 AVL9Q8NBF6 648 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 OR4D9Q8NGE8 314 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 OR52K1Q8NGK4 314 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 TMEM159Q96B96 161 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 CXorf40BQ96DE9 158 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 RTP4Q96DX8 246 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 TLR10Q9BXR5 811 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 SMOXQ9NWM0 555 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.35■□□□□ 0.21
SREBF1-219ENST00000580540 ZNF624Q9P2J8 865 aaPredicted RBP16.35■□□□□ 0.21
SREBF1-219ENST00000580540 KLHL3Q9UH77 587 aa16.35■□□□□ 0.21
SREBF1-219ENST00000580540 OR52A4PA6NMU1 304 aa16.34■□□□□ 0.21
SREBF1-219ENST00000580540 GAS8O95995 478 aa16.34■□□□□ 0.21
SREBF1-219ENST00000580540 RALBP11234 206 aa16.34■□□□□ 0.21
SREBF1-219ENST00000580540 XRCC1P18887 633 aaPredicted RBP16.34■□□□□ 0.21
SREBF1-219ENST00000580540 CSTF2P33240 577 aaKnown RBP eCLIP16.34■□□□□ 0.21
SREBF1-219ENST00000580540 FDFT1P37268 417 aa16.34■□□□□ 0.21
SREBF1-219ENST00000580540 HALP42357 657 aa16.34■□□□□ 0.21
SREBF1-219ENST00000580540 UBE2IP63279 158 aaKnown RBP16.34■□□□□ 0.21
SREBF1-219ENST00000580540 TLE3Q04726 772 aa16.34■□□□□ 0.21
SREBF1-219ENST00000580540 BROXQ5VW32 411 aa16.34■□□□□ 0.21
SREBF1-219ENST00000580540 MICALCLQ6ZW33 695 aa16.34■□□□□ 0.21
SREBF1-219ENST00000580540 TAS2R42Q7RTR8 314 aa16.34■□□□□ 0.21
SREBF1-219ENST00000580540 GSTA5Q7RTV2 222 aa16.34■□□□□ 0.21
SREBF1-219ENST00000580540 CLEC14AQ86T13 490 aa16.34■□□□□ 0.21
SREBF1-219ENST00000580540 LINC00523Q86TU6 105 aa16.34■□□□□ 0.21
SREBF1-219ENST00000580540 USP7Q93009 1102 aa16.34■□□□□ 0.21
SREBF1-219ENST00000580540 ULK4Q96C45 1275 aa16.34■□□□□ 0.21
SREBF1-219ENST00000580540 CCDC97Q96F63 343 aaPredicted RBP16.34■□□□□ 0.21
SREBF1-219ENST00000580540 DPYSL5Q9BPU6 564 aa16.34■□□□□ 0.21
SREBF1-219ENST00000580540 RAB6BQ9NRW1 208 aa16.34■□□□□ 0.21
SREBF1-219ENST00000580540 PSMD13Q9UNM6 376 aa16.34■□□□□ 0.21
SREBF1-219ENST00000580540 CHD6Q8TD26 2715 aa16.33■□□□□ 0.21
SREBF1-219ENST00000580540 PRAMEF33A0A0G2JMD5 474 aa16.33■□□□□ 0.2
SREBF1-219ENST00000580540 KCNJ13O60928 360 aa16.33■□□□□ 0.2
SREBF1-219ENST00000580540 ZSCAN5DPP0CG00 497 aa16.33■□□□□ 0.2
SREBF1-219ENST00000580540 THRAP10827 490 aa16.33■□□□□ 0.2
SREBF1-219ENST00000580540 CCL4P13236 92 aa16.33■□□□□ 0.2
SREBF1-219ENST00000580540 BRAFP15056 766 aa16.33■□□□□ 0.2
SREBF1-219ENST00000580540 TYRP1P17643 537 aa16.33■□□□□ 0.2
SREBF1-219ENST00000580540 AMD1P17707 334 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms