RNA–Protein interactions for RNA: ENST00000576921.1

HCFC1R1-209, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best)

Gene HCFC1R1, Length 1,199 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-209ENST00000576921 PRAMEF10O60809 474 aa20.8■□□□□ 0.92
HCFC1R1-209ENST00000576921 THRAP10827 490 aa20.8■□□□□ 0.92
HCFC1R1-209ENST00000576921 MSH3P20585 1137 aa20.8■□□□□ 0.92
HCFC1R1-209ENST00000576921 IDSP22304 550 aa20.8■□□□□ 0.92
HCFC1R1-209ENST00000576921 CTSCP53634 463 aa20.8■□□□□ 0.92
HCFC1R1-209ENST00000576921 PDE1BQ01064 536 aa20.8■□□□□ 0.92
HCFC1R1-209ENST00000576921 RPS6KA1Q15418 735 aa20.8■□□□□ 0.92
HCFC1R1-209ENST00000576921 DENND5AQ6IQ26 1287 aa20.8■□□□□ 0.92
HCFC1R1-209ENST00000576921 DET1Q7L5Y6 550 aa20.8■□□□□ 0.92
HCFC1R1-209ENST00000576921 C11orf96Q7Z7L8 435 aa20.8■□□□□ 0.92
HCFC1R1-209ENST00000576921 LRRC8AQ8IWT6 810 aa20.8■□□□□ 0.92
HCFC1R1-209ENST00000576921 OR13C4Q8NGS5 318 aa20.8■□□□□ 0.92
HCFC1R1-209ENST00000576921 NCSTNQ92542 709 aa20.8■□□□□ 0.92
HCFC1R1-209ENST00000576921 DPYSL5Q9BPU6 564 aa20.8■□□□□ 0.92
HCFC1R1-209ENST00000576921 TBC1D10AQ9BXI6 508 aa20.8■□□□□ 0.92
HCFC1R1-209ENST00000576921 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.8■□□□□ 0.92
HCFC1R1-209ENST00000576921 PRORYQ9H606 182 aa20.8■□□□□ 0.92
HCFC1R1-209ENST00000576921 ASB8Q9H765 288 aa20.8■□□□□ 0.92
HCFC1R1-209ENST00000576921 LRRC40Q9H9A6 602 aa20.8■□□□□ 0.92
HCFC1R1-209ENST00000576921 CPNE5Q9HCH3 593 aa20.8■□□□□ 0.92
HCFC1R1-209ENST00000576921 SMOXQ9NWM0 555 aa20.8■□□□□ 0.92
HCFC1R1-209ENST00000576921 CCL22O00626 93 aa20.79■□□□□ 0.92
HCFC1R1-209ENST00000576921 HGSO14964 777 aaPredicted RBP20.79■□□□□ 0.92
HCFC1R1-209ENST00000576921 SRP72O76094 671 aaKnown RBP20.79■□□□□ 0.92
HCFC1R1-209ENST00000576921 VIPP01282 170 aa20.79■□□□□ 0.92
HCFC1R1-209ENST00000576921 CCL4P13236 92 aa20.79■□□□□ 0.92
HCFC1R1-209ENST00000576921 ZNF140P52738 457 aaPredicted RBP20.79■□□□□ 0.92
HCFC1R1-209ENST00000576921 TMPRSS3P57727 454 aa20.79■□□□□ 0.92
HCFC1R1-209ENST00000576921 UBE2IP63279 158 aaKnown RBP20.79■□□□□ 0.92
HCFC1R1-209ENST00000576921 TRA2AQ13595 282 aaKnown RBP eCLIP20.79■□□□□ 0.92
HCFC1R1-209ENST00000576921 SEPT6Q14141 434 aa20.79■□□□□ 0.92
HCFC1R1-209ENST00000576921 MEI1Q5TIA1 1274 aa20.79■□□□□ 0.92
HCFC1R1-209ENST00000576921 TMEM71Q6P5X7 295 aa20.79■□□□□ 0.92
HCFC1R1-209ENST00000576921 TMEM220Q6QAJ8 160 aa20.79■□□□□ 0.92
HCFC1R1-209ENST00000576921 AMZ2Q86W34 360 aa20.79■□□□□ 0.92
HCFC1R1-209ENST00000576921 SLC13A5Q86YT5 568 aaPredicted RBP20.79■□□□□ 0.92
HCFC1R1-209ENST00000576921 USP7Q93009 1102 aa20.79■□□□□ 0.92
HCFC1R1-209ENST00000576921 PIH1D1Q9NWS0 290 aaKnown RBP20.79■□□□□ 0.92
HCFC1R1-209ENST00000576921 FEZ2Q9UHY8 353 aaPredicted RBP20.79■□□□□ 0.92
HCFC1R1-209ENST00000576921 CRLS1Q9UJA2 301 aa20.79■□□□□ 0.92
HCFC1R1-209ENST00000576921 MGAQ8IWI9 3026 aa20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 OR52A4PA6NMU1 304 aa20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 A8MU76 341 aa20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 LIASO43766 372 aa20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 TPH1P17752 444 aa20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 CSTF2P33240 577 aaKnown RBP eCLIP20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 EPHA4P54764 986 aa20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 UCNP55089 124 aa20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 CLN3Q13286 438 aa20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 SQSTM1Q13501 440 aa20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 SNX1Q13596 522 aa20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 FNBP1LQ5T0N5 605 aa20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 KCTD11Q693B1 232 aa20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 FAM129CQ86XR2 697 aa20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 KLHDC8BQ8IXV7 354 aa20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 AGBL5Q8NDL9 886 aa20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 NAT14Q8WUY8 206 aa20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 C1orf54Q8WWF1 131 aa20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 CXorf40BQ96DE9 158 aa20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 ARNT2Q9HBZ2 717 aa20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 FOXJ2Q9P0K8 574 aa20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 ZNF624Q9P2J8 865 aaPredicted RBP20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 FAM8A1Q9UBU6 413 aa20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 KLHL3Q9UH77 587 aa20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 AHCTF1Q8WYP5 2266 aa20.78■□□□□ 0.92
HCFC1R1-209ENST00000576921 LILRA5A6NI73 299 aa20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 PRR19A6NJB7 356 aa20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 NVLO15381 856 aaKnown RBP20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 NRDCO43847 1150 aa20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 POP7O75817 140 aaKnown RBP20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 AP2A1O95782 977 aa20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 IFNB1P01574 187 aa20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 BRAFP15056 766 aa20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 XRCC1P18887 633 aaPredicted RBP20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 HADHAP40939 763 aa20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 SLC19A1P41440 591 aa20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 HALP42357 657 aa20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 CCZ1BP86790 482 aa20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 CCZ1P86791 482 aaPredicted RBP20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 MSLNQ13421 630 aaPredicted RBP20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 POU6F1Q14863 301 aa20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 LONRF2Q1L5Z9 754 aa20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 GPR155Q7Z3F1 870 aa20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 BEND7Q8N7W2 519 aaPredicted RBP20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 DNAJC1Q96KC8 554 aaKnown RBP20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 FRMD8P1Q9BZ68 369 aaPredicted RBP20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 FAM96AQ9H5X1 160 aa20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 PSMD13Q9UNM6 376 aa20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 ZNF148Q9UQR1 794 aa20.77■□□□□ 0.92
HCFC1R1-209ENST00000576921 SDK2Q58EX2 2172 aa20.76■□□□□ 0.91
HCFC1R1-209ENST00000576921 C9orf172C9J069 976 aa20.76■□□□□ 0.91
HCFC1R1-209ENST00000576921 LDB2O43679 373 aa20.76■□□□□ 0.91
HCFC1R1-209ENST00000576921 ITGALP20701 1170 aa20.76■□□□□ 0.91
HCFC1R1-209ENST00000576921 XIAPP98170 497 aa20.76■□□□□ 0.91
HCFC1R1-209ENST00000576921 NFE2L1Q14494 772 aa20.76■□□□□ 0.91
HCFC1R1-209ENST00000576921 OASLQ15646 514 aaKnown RBP20.76■□□□□ 0.91
HCFC1R1-209ENST00000576921 ARHGAP40Q5TG30 622 aa20.76■□□□□ 0.91
HCFC1R1-209ENST00000576921 TMEM164Q5U3C3 297 aa20.76■□□□□ 0.91
HCFC1R1-209ENST00000576921 AGAP9Q5VTM2 703 aa20.76■□□□□ 0.91
HCFC1R1-209ENST00000576921 WDR74Q6RFH5 385 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms