RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 MROH6A6NGR9 719 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 OR51F1A6NGY5 319 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 H7C0S8 307 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 KIR2DS3K7RE56 304 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 AGRPO00253 132 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 ZW10O43264 779 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 B4GAT1O43505 415 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 PHF2O75151 1096 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 POP7O75817 140 aaKnown RBP11.63□□□□□ -0.55
RAB5C-204ENST00000547517 CAPNS1P04632 268 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 RALBP11234 206 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 ACRV1P26436 265 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 RPL10P27635 214 aaKnown RBP11.63□□□□□ -0.55
RAB5C-204ENST00000547517 GPR3P46089 330 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 ARSDP51689 593 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 DRG2P55039 364 aaKnown RBP11.63□□□□□ -0.55
RAB5C-204ENST00000547517 SESN2P58004 480 aaPredicted RBP11.63□□□□□ -0.55
RAB5C-204ENST00000547517 CACNG1Q06432 222 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 GPS1Q13098 491 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 KIR2DS5Q14953 304 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 RTP5Q14D33 572 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 CYP1B1Q16678 543 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.63□□□□□ -0.55
RAB5C-204ENST00000547517 NKAIN2Q5VXU1 208 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 FOXR1Q6PIV2 292 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 CCDC137Q6PK04 289 aaKnown RBP11.63□□□□□ -0.55
RAB5C-204ENST00000547517 TAS2R42Q7RTR8 314 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 TMPRSS9Q7Z410 1059 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 SLC9B2Q86UD5 537 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 AMZ2Q86W34 360 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 SERPINA9Q86WD7 417 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 TRIM48Q8IWZ4 208 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 PPHLN1Q8NEY8 458 aaKnown RBP11.63□□□□□ -0.55
RAB5C-204ENST00000547517 ACTRT1Q8TDG2 376 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 SGF29Q96ES7 293 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 TMEM74Q96NL1 305 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 COPS8Q99627 209 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 NUDT22Q9BRQ3 303 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 SARS2Q9NP81 518 aaKnown RBP11.63□□□□□ -0.55
RAB5C-204ENST00000547517 CPNE7Q9UBL6 633 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 DKK4Q9UBT3 224 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 SLC2A6Q9UGQ3 507 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 RAXQ9Y2V3 346 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 TCAF1Q9Y4C2 921 aa11.63□□□□□ -0.55
RAB5C-204ENST00000547517 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.63□□□□□ -0.55
RAB5C-204ENST00000547517 IGHV1OR21-1A0A087WYE8 117 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 CCDC187A0A096LP49 1063 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 A0A1W2PNU3 283 aaPredicted RBP11.62□□□□□ -0.55
RAB5C-204ENST00000547517 TCRBV7S3A2A0A539 114 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 CCDC162PA2VCL2 907 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 PRR19A6NJB7 356 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 OR52A4PA6NMU1 304 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 AGAP14A8MT82 685 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 CFAP99D6REC4 459 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 TAF4O00268 1085 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 CES2O00748 559 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 CPNE6O95741 557 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 KRT14P02533 472 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 BRAFP15056 766 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 TCP1P17987 556 aaKnown RBP11.62□□□□□ -0.55
RAB5C-204ENST00000547517 IDSP22304 550 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 CSF2RBP32927 897 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 COILP38432 576 aaPredicted RBP11.62□□□□□ -0.55
RAB5C-204ENST00000547517 MAPK9P45984 424 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 UBE2IP63279 158 aaKnown RBP11.62□□□□□ -0.55
RAB5C-204ENST00000547517 CRADDP78560 199 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 LAMB3Q13751 1172 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 NFE2L1Q14494 772 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 SKIDA1Q1XH10 827 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 GPR33Q49SQ1 333 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 BCL7AQ4VC05 210 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 PHF19Q5T6S3 580 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 TSTD2Q5T7W7 516 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 AFTPHQ6ULP2 937 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 FAM83HQ6ZRV2 1179 aaPredicted RBP11.62□□□□□ -0.55
RAB5C-204ENST00000547517 USP53Q70EK8 1073 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 OR13J1Q8NGT2 312 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 GRAMD1AQ96CP6 724 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 AHCYL2Q96HN2 611 aaKnown RBP11.62□□□□□ -0.55
RAB5C-204ENST00000547517 CDKN2AIPNLQ96HQ2 116 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 ZNF514Q96K75 400 aaPredicted RBP11.62□□□□□ -0.55
RAB5C-204ENST00000547517 CAPZA3Q96KX2 299 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 ZNF778Q96MU6 729 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 RANBP9Q96S59 729 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 NAPGQ99747 312 aaPredicted RBP11.62□□□□□ -0.55
RAB5C-204ENST00000547517 STRADBQ9C0K7 418 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 POLR1BQ9H9Y6 1135 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 ZDHHC3Q9NYG2 299 aa11.62□□□□□ -0.55
RAB5C-204ENST00000547517 USP24Q9UPU5 2620 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.61□□□□□ -0.55
RAB5C-204ENST00000547517 TRBV5-4A0A0C4DH59 114 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 OR5K4A6NMS3 321 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 SRRM3A6NNA2 597 aaPredicted RBP11.61□□□□□ -0.55
RAB5C-204ENST00000547517 SGTAO43765 313 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 DUX1O43812 170 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 GOT2P00505 430 aaKnown RBP11.61□□□□□ -0.55
RAB5C-204ENST00000547517 VIPP01282 170 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 ATP1B2P14415 290 aaPredicted RBP11.61□□□□□ -0.55
RAB5C-204ENST00000547517 TPSB2P20231 275 aa11.61□□□□□ -0.55
RAB5C-204ENST00000547517 ADRA1DP25100 572 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms