RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 MAGEE1Q9HCI5 957 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 SPTLC3Q9NUV7 552 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 POT1Q9NUX5 634 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 UVRAGQ9P2Y5 699 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 POLHQ9Y253 713 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 PTPN13Q12923 2485 aa11.28□□□□□ -0.6
RAB5C-203ENST00000546881 ZNF106Q9H2Y7 1883 aaKnown RBP11.27□□□□□ -0.6
RAB5C-203ENST00000546881 PIPSLA2A3N6 862 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 K7EM74 188 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 APOL1O14791 398 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 PPP1R12AO14974 1030 aaPredicted RBP11.27□□□□□ -0.61
RAB5C-203ENST00000546881 CHUKO15111 745 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 TOX3O15405 576 aaPredicted RBP11.27□□□□□ -0.61
RAB5C-203ENST00000546881 MTSS1O43312 755 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 VEGFDO43915 354 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 PMPCBO75439 489 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 SPAG6O75602 509 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 IPO7O95373 1038 aaKnown RBP11.27□□□□□ -0.61
RAB5C-203ENST00000546881 MT-CYBP00156 380 aaPredicted RBP11.27□□□□□ -0.61
RAB5C-203ENST00000546881 KRT1P04264 644 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 FURINP09958 794 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 TNNT1P13805 278 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 BRAFP15056 766 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 BPIP17213 487 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 VCLP18206 1134 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 HALP42357 657 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 CAPZBP47756 277 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 MLLT10P55197 1068 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 IL11RAQ14626 422 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 PDK1Q15118 436 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 KHDC1Q4VXA5 237 aaKnown RBP11.27□□□□□ -0.61
RAB5C-203ENST00000546881 CRTC2Q53ET0 693 aaPredicted RBP11.27□□□□□ -0.61
RAB5C-203ENST00000546881 ODF2Q5BJF6 829 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 PDPK2PQ6A1A2 396 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 ASB18Q6ZVZ8 466 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 TMC3Q7Z5M5 1100 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 ATCAYQ86WG3 371 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 PPP1R3BQ86XI6 285 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 RFX6Q8HWS3 928 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 ZNF547Q8IVP9 402 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 TTC30BQ8N4P2 665 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 TC2NQ8N9U0 490 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 TTC25Q96NG3 672 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 SLC25A51Q9H1U9 297 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 GRPEL1Q9HAV7 217 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 SLC40A1Q9NP59 571 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 UBP1Q9NZI7 540 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 KCND3Q9UK17 655 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 MAN2B2Q9Y2E5 1009 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 SPO11Q9Y5K1 396 aa11.27□□□□□ -0.61
RAB5C-203ENST00000546881 F5H423 210 aaPredicted RBP11.26□□□□□ -0.61
RAB5C-203ENST00000546881 AURKAO14965 403 aa11.26□□□□□ -0.61
RAB5C-203ENST00000546881 RFPL1O75677 317 aa11.26□□□□□ -0.61
RAB5C-203ENST00000546881 FGF5P12034 268 aa11.26□□□□□ -0.61
RAB5C-203ENST00000546881 CDC25BP30305 580 aa11.26□□□□□ -0.61
RAB5C-203ENST00000546881 CYLC1P35663 651 aaPredicted RBP11.26□□□□□ -0.61
RAB5C-203ENST00000546881 ARL4DP49703 201 aa11.26□□□□□ -0.61
RAB5C-203ENST00000546881 PPP1CAP62136 330 aa11.26□□□□□ -0.61
RAB5C-203ENST00000546881 TUBB3Q13509 450 aa11.26□□□□□ -0.61
RAB5C-203ENST00000546881 DNASE1L3Q13609 305 aa11.26□□□□□ -0.61
RAB5C-203ENST00000546881 KCNAB1Q14722 419 aa11.26□□□□□ -0.61
RAB5C-203ENST00000546881 PLCL1Q15111 1095 aa11.26□□□□□ -0.61
RAB5C-203ENST00000546881 SPA17Q15506 151 aa11.26□□□□□ -0.61
RAB5C-203ENST00000546881 ATP13A5Q4VNC0 1218 aa11.26□□□□□ -0.61
RAB5C-203ENST00000546881 ABRAXAS1Q6UWZ7 409 aa11.26□□□□□ -0.61
RAB5C-203ENST00000546881 PRSS42Q7Z5A4 293 aa11.26□□□□□ -0.61
RAB5C-203ENST00000546881 RBM12BQ8IXT5 1001 aaKnown RBP11.26□□□□□ -0.61
RAB5C-203ENST00000546881 FAM26EQ8N5C1 309 aa11.26□□□□□ -0.61
RAB5C-203ENST00000546881 SIDT2Q8NBJ9 832 aaKnown RBP11.26□□□□□ -0.61
RAB5C-203ENST00000546881 CT55Q8WUE5 264 aa11.26□□□□□ -0.61
RAB5C-203ENST00000546881 PDE7BQ9NP56 450 aa11.26□□□□□ -0.61
RAB5C-203ENST00000546881 LUC7LQ9NQ29 371 aaKnown RBP11.26□□□□□ -0.61
RAB5C-203ENST00000546881 IMPACTQ9P2X3 320 aa11.26□□□□□ -0.61
RAB5C-203ENST00000546881 LCMT1Q9UIC8 334 aa11.26□□□□□ -0.61
RAB5C-203ENST00000546881 TLK1Q9UKI8 766 aa11.26□□□□□ -0.61
RAB5C-203ENST00000546881 PADI1Q9ULC6 663 aa11.26□□□□□ -0.61
RAB5C-203ENST00000546881 PSMD13Q9UNM6 376 aa11.26□□□□□ -0.61
RAB5C-203ENST00000546881 WDR37Q9Y2I8 494 aa11.26□□□□□ -0.61
RAB5C-203ENST00000546881 DOPEY2Q9Y3R5 2298 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 A0A0A6YYK5 440 aaPredicted RBP11.25□□□□□ -0.61
RAB5C-203ENST00000546881 CREG1O75629 220 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 DNAJB5O75953 348 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 TIAF1O95411 115 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 NDST3O95803 873 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 MT-ND3P03897 115 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 GP1BBP13224 206 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 NELFEP18615 380 aaKnown RBP11.25□□□□□ -0.61
RAB5C-203ENST00000546881 PBLDP30039 288 aaPredicted RBP11.25□□□□□ -0.61
RAB5C-203ENST00000546881 TNNT3P45378 269 aaPredicted RBP11.25□□□□□ -0.61
RAB5C-203ENST00000546881 TMEM115Q12893 351 aaPredicted RBP11.25□□□□□ -0.61
RAB5C-203ENST00000546881 NOMO1Q15155 1222 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 PPP2R5EQ16537 467 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.25□□□□□ -0.61
RAB5C-203ENST00000546881 AGAP9Q5VTM2 703 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 SLC9A4Q6AI14 798 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 TCTN3Q6NUS6 607 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 CYB5D1Q6P9G0 228 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 SLC25A41Q8N5S1 370 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 GPR150Q8NGU9 434 aa11.25□□□□□ -0.61
RAB5C-203ENST00000546881 KLHL6Q8WZ60 621 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms