RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 ASB14A6NK59 587 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 M0QX08 132 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 ARNTLO00327 626 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 IFRD1O00458 451 aaPredicted RBP17.42■□□□□ 0.38
RAB40C-205ENST00000539661 KERAO60938 352 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 NDST3O95803 873 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 ZNF286BP0CG31 522 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 ACVR2AP27037 513 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 KCNAB2Q13303 367 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 DNASE1L3Q13609 305 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 PGS1Q32NB8 556 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 NOMO2Q5JPE7 1267 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 ZNF691Q5VV52 312 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 AFMIDQ63HM1 303 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 ADCK1Q86TW2 530 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 ARMC8Q8IUR7 673 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 FBLIM1Q8WUP2 373 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 IMP4Q96G21 291 aaKnown RBP17.42■□□□□ 0.38
RAB40C-205ENST00000539661 SMPD4Q9NXE4 827 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 RNF181Q9P0P0 153 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 HHLA1C9JL84 531 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 RPS17P08708 135 aaKnown RBP17.42■□□□□ 0.38
RAB40C-205ENST00000539661 CES1P23141 567 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 SERPINB1P30740 379 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 PAGE2BQ5JRK9 111 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 MANEALQ5VSG8 457 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 DLEU7Q6UYE1 221 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 PRSS48Q7RTY5 328 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 FBXO39Q8N4B4 442 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 ATP6V0D2Q8N8Y2 350 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 STAG3L4Q8TBR4 150 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 RORBQ92753 470 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 KIAA1191Q96A73 305 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 TXNDC15Q96J42 360 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 NSMCE3Q96MG7 304 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 C1QTNF3Q9BXJ4 246 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 SMURF2Q9HAU4 748 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 MOV10Q9HCE1 1003 aaKnown RBP17.42■□□□□ 0.38
RAB40C-205ENST00000539661 KLK14Q9P0G3 267 aa17.42■□□□□ 0.38
RAB40C-205ENST00000539661 MARCH4Q9P2E8 410 aaPredicted RBP17.42■□□□□ 0.38
RAB40C-205ENST00000539661 LOC100130705A0A1B0GUX0 176 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 FAM47E-STBD1D6RA91 191 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 H3BRB1 525 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 TOR1BO14657 336 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 SLC4A1P02730 911 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 SLC2A3P11169 496 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 AGXTP21549 392 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 PIGAP37287 484 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 TIAL1Q01085 375 aaKnown RBP eCLIP17.41■□□□□ 0.38
RAB40C-205ENST00000539661 EMX1Q04741 257 aaPredicted RBP17.41■□□□□ 0.38
RAB40C-205ENST00000539661 PIGFQ07326 219 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 RFX4Q33E94 735 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 ADPRMQ3LIE5 342 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 ZC3H12BQ5HYM0 836 aaKnown RBP17.41■□□□□ 0.38
RAB40C-205ENST00000539661 BRMS1LQ5PSV4 323 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 ZNF549Q6P9A3 640 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 RBM23Q86U06 439 aaKnown RBP17.41■□□□□ 0.38
RAB40C-205ENST00000539661 LDB1Q86U70 411 aaPredicted RBP17.41■□□□□ 0.38
RAB40C-205ENST00000539661 OR8J3Q8NGG0 315 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 GPR150Q8NGU9 434 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 DYNC2LI1Q8TCX1 351 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 EMID1Q96A84 441 aaPredicted RBP17.41■□□□□ 0.38
RAB40C-205ENST00000539661 PABPC5Q96DU9 382 aaKnown RBP17.41■□□□□ 0.38
RAB40C-205ENST00000539661 YIPF6Q96EC8 236 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 TRIM62Q9BVG3 475 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 PIF1Q9H611 641 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 CRYL1Q9Y2S2 319 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 PPP2R3BQ9Y5P8 575 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 SLC16A6O15403 523 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 IL12AP29459 219 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 CD40LGP29965 261 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 PPP5CP53041 499 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 NECAB2Q7Z6G3 386 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 SLC22A16Q86VW1 577 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 SULF1Q8IWU6 871 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 PROKR1Q8TCW9 393 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 SH3RF2Q8TEC5 729 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 SIK2Q9H0K1 926 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 TRIT1Q9H3H1 467 aaKnown RBP17.41■□□□□ 0.38
RAB40C-205ENST00000539661 FNIP2Q9P278 1114 aa17.41■□□□□ 0.38
RAB40C-205ENST00000539661 MLYCDO95822 493 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 CST1P01037 141 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 IGLV3-25P01717 112 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 PCNAP12004 261 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 NFKBIAP25963 317 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 ARSDP51689 593 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 RABGGTBP53611 331 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 TPTEP56180 551 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 UGT3A1Q6NUS8 523 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 RALGPS2Q86X27 583 aaPredicted RBP17.4■□□□□ 0.38
RAB40C-205ENST00000539661 LGI2Q8N0V4 545 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 GPC2Q8N158 579 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 OR52E4Q8NGH9 312 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 PEX13Q92968 403 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 GLMNQ92990 594 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 TPK1Q9H3S4 243 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 EHD1Q9H4M9 534 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 SPC25Q9HBM1 224 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 SYTL2Q9HCH5 934 aa17.4■□□□□ 0.38
RAB40C-205ENST00000539661 VTA1Q9NP79 307 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms