RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 CAAP1Q9H8G2 361 aa18.14■□□□□ 0.49
SDC2-202ENST00000518385 TBC1D23Q9NUY8 699 aa18.14■□□□□ 0.49
SDC2-202ENST00000518385 CNOT6Q9ULM6 557 aaKnown RBP18.14■□□□□ 0.49
SDC2-202ENST00000518385 DOCK6Q96HP0 2047 aa18.14■□□□□ 0.49
SDC2-202ENST00000518385 SNAP91O60641 907 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 IPO13O94829 963 aaKnown RBP18.13■□□□□ 0.49
SDC2-202ENST00000518385 UMPSP11172 480 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 MRPL19P49406 292 aaKnown RBP18.13■□□□□ 0.49
SDC2-202ENST00000518385 RGS19P49795 217 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 ARF5P84085 180 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 ZXDBP98169 803 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 TMEM198Q66K66 360 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 FKBP9P1Q75LS8 142 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 PATL1Q86TB9 770 aaKnown RBP18.13■□□□□ 0.49
SDC2-202ENST00000518385 SMYD1Q8NB12 490 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 PDPRQ8NCN5 879 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 AGR3Q8TD06 166 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 BLOC1S5Q8TDH9 187 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 LRTOMTQ8WZ04 291 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 TCEAL4Q96EI5 215 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 C2orf49Q9BVC5 232 aaPredicted RBP18.13■□□□□ 0.49
SDC2-202ENST00000518385 TDRD1Q9BXT4 1180 aaKnown RBP18.13■□□□□ 0.49
SDC2-202ENST00000518385 POMKQ9H5K3 350 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 NLE1Q9NVX2 485 aaPredicted RBP18.13■□□□□ 0.49
SDC2-202ENST00000518385 GID8Q9NWU2 228 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 GTSE1Q9NYZ3 720 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 ABCD2Q9UBJ2 740 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 SH3GLB1Q9Y371 365 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 SNX13Q9Y5W8 968 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 TTC24A2A3L6 582 aaPredicted RBP18.13■□□□□ 0.49
SDC2-202ENST00000518385 TRIM64BA6NI03 449 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 C2orf81A6NN90 581 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 VPS4BO75351 444 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 S1PR4O95977 384 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 CKMP06732 381 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 PCSK6P29122 969 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 ABCG1P45844 678 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 MAPK8P45983 427 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 TAS2R39P59534 338 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 NFKB2Q00653 900 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 CDH18Q13634 790 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 ACAP2Q15057 778 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 AGKQ53H12 422 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 ARHGAP15Q53QZ3 475 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 TECRLQ5HYJ1 363 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 PRSS36Q5K4E3 855 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 TMTC4Q5T4D3 741 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 GPR158Q5T848 1215 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 LCN8Q6JVE9 175 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 RETSATQ6NUM9 610 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 GK5Q6ZS86 529 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 GRASPQ7Z6J2 395 aaPredicted RBP18.13■□□□□ 0.49
SDC2-202ENST00000518385 GPR180Q86V85 440 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 MINDY1Q8N5J2 469 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 CCNYL1Q8N7R7 359 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 ACVR1CQ8NER5 493 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 SLCO4A1Q96BD0 722 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 OMDQ99983 421 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 C19orf43Q9BQ61 176 aa18.13■□□□□ 0.49
SDC2-202ENST00000518385 NOTCH4Q99466 2003 aa18.12■□□□□ 0.49
SDC2-202ENST00000518385 ZNF197O14709 1029 aa18.12■□□□□ 0.49
SDC2-202ENST00000518385 PHGDHO43175 533 aaKnown RBP18.12■□□□□ 0.49
SDC2-202ENST00000518385 LTA4HP09960 611 aaKnown RBP18.12■□□□□ 0.49
SDC2-202ENST00000518385 CSNK1DP48730 415 aa18.12■□□□□ 0.49
SDC2-202ENST00000518385 AP1S1P61966 158 aa18.12■□□□□ 0.49
SDC2-202ENST00000518385 GRIK2Q13002 908 aa18.12■□□□□ 0.49
SDC2-202ENST00000518385 NCEH1Q6PIU2 408 aa18.12■□□□□ 0.49
SDC2-202ENST00000518385 CNSTQ6PJW8 725 aa18.12■□□□□ 0.49
SDC2-202ENST00000518385 VN1R2Q8NFZ6 395 aa18.12■□□□□ 0.49
SDC2-202ENST00000518385 OR4L1Q8NH43 312 aa18.12■□□□□ 0.49
SDC2-202ENST00000518385 NXNL1Q96CM4 212 aa18.12■□□□□ 0.49
SDC2-202ENST00000518385 RMDN1Q96DB5 314 aa18.12■□□□□ 0.49
SDC2-202ENST00000518385 L3HYPDHQ96EM0 354 aa18.12■□□□□ 0.49
SDC2-202ENST00000518385 ALG14Q96F25 216 aa18.12■□□□□ 0.49
SDC2-202ENST00000518385 POPDC3Q9HBV1 291 aa18.12■□□□□ 0.49
SDC2-202ENST00000518385 INTS10Q9NVR2 710 aaKnown RBP18.12■□□□□ 0.49
SDC2-202ENST00000518385 DUS2Q9NX74 493 aaKnown RBP18.12■□□□□ 0.49
SDC2-202ENST00000518385 KIAA1522Q9P206 1035 aaPredicted RBP18.12■□□□□ 0.49
SDC2-202ENST00000518385 ZMYM5Q9UJ78 669 aa18.12■□□□□ 0.49
SDC2-202ENST00000518385 PACSIN3Q9UKS6 424 aa18.12■□□□□ 0.49
SDC2-202ENST00000518385 G3BP2Q9UN86 482 aaKnown RBP18.12■□□□□ 0.49
SDC2-202ENST00000518385 VPS9D1Q9Y2B5 631 aa18.12■□□□□ 0.49
SDC2-202ENST00000518385 VWA7Q9Y334 891 aa18.12■□□□□ 0.49
SDC2-202ENST00000518385 RAI2Q9Y5P3 530 aa18.12■□□□□ 0.49
SDC2-202ENST00000518385 E2F8A0AVK6 867 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 STX16-NPEPL1H3BU86 382 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 PFDN6O15212 129 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 CD3EAPO15446 510 aaKnown RBP18.11■□□□□ 0.49
SDC2-202ENST00000518385 AKAP10O43572 662 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 CD160O95971 181 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 SAT1P21673 171 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 FASP25445 335 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 RGRP47804 291 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 CD97P48960 835 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 ARSDP51689 593 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 PLK1P53350 603 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 NTHL1P78549 312 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 PRKCQQ04759 706 aa18.11■□□□□ 0.49
SDC2-202ENST00000518385 GRSF1Q12849 480 aaKnown RBP eCLIP18.11■□□□□ 0.49
SDC2-202ENST00000518385 GK3PQ14409 553 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms