RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 CCNT1O60563 726 aaKnown RBP4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 PFKFB2O60825 505 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 ATP5HO75947 161 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 SNX4O95219 450 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 CD4P01730 458 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 RETP07949 1114 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 PAEPP09466 180 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 NHLRC4P0CG21 123 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 CYP19A1P11511 503 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 EEF2P13639 858 aaKnown RBP4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 GAP43P17677 238 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 NR1D1P20393 614 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 CTNNA2P26232 953 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 PKLRP30613 574 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 CTNNA1P35221 906 aaKnown RBP4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 PPM1AP35813 382 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 VHLP40337 213 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 VPS41P49754 854 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 EIF2B2P49770 351 aaKnown RBP4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 GDI2P50395 445 aaKnown RBP4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 GNG2P59768 71 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 RPL26P61254 145 aaKnown RBP4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 POLR2GP62487 172 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 ID2Q02363 134 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 RIPPLY1Q0D2K3 151 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 PDCLQ13371 301 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 PKP1Q13835 747 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 MVPQ14764 893 aaKnown RBP4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 FUT11Q495W5 492 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 SLC9C1Q4G0N8 1177 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 ZNF569Q5MCW4 686 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 CLVS2Q5SYC1 327 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 ATPAF1Q5TC12 328 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 C12orf60Q5U649 245 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 HAUS3Q68CZ6 603 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 GRHL2Q6ISB3 625 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 ACSM6Q6P461 480 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 C4orf22Q6V702 233 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 KIF6Q6ZMV9 814 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 ZNF66Q6ZN08 573 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 STOX1Q6ZVD7 989 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 GPR141Q7Z602 305 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 NET1Q7Z628 596 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 LONP2Q86WA8 852 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 HEATR4Q86WZ0 1026 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 ZNF677Q86XU0 584 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 CD302Q8IX05 232 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 ARHGAP24Q8N264 748 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 ELMOD1Q8N336 334 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 ENDOVQ8N8Q3 282 aaKnown RBP4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 ATP6V0D2Q8N8Y2 350 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 ANKRD42Q8N9B4 389 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 MLKLQ8NB16 471 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 MINDY2Q8NBR6 621 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 OR10Z1Q8NGY1 313 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 HCAR2Q8TDS4 363 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 OTUD7AQ8TE49 926 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 ZNF274Q96GC6 653 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 REXO5Q96IC2 774 aaKnown RBP4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 XPO6Q96QU8 1125 aaKnown RBP4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 USP28Q96RU2 1077 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 GDF15Q99988 308 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 DESI2Q9BSY9 194 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 NUSAP1Q9BXS6 441 aaKnown RBP4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 MTMR12Q9C0I1 747 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 RAB17Q9H0T7 212 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 SH2D4AQ9H788 454 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 CNOT10Q9H9A5 744 aaKnown RBP4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 WASH6PQ9NQA3 447 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 ABHD10Q9NUJ1 306 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 UVRAGQ9P2Y5 699 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 TEKT2Q9UIF3 430 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 MOSPD1Q9UJG1 213 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 DNAJC12Q9UKB3 198 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 VPS4AQ9UN37 437 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 GTF2A1LQ9UNN4 478 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 ERVK-11Q9UQG0 969 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 CBY1Q9Y3M2 126 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 USH1CQ9Y6N9 552 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 RGPD8O14715 1765 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 MROH7-TTC4A0A0A0MT08 1334 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 MAP3K15Q6ZN16 1313 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 ANKRD26Q9UPS8 1709 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 COL14A1Q05707 1796 aaKnown RBP4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 SMIM35A0A1B0GVV1 85 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 DNAJC9-AS1A6NH13 148 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 CGB1A6NKQ9 187 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 KCNU1A8MYU2 1149 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 J3KTA2 159 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 DNM1LO00429 736 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 E2F3O00716 465 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 NPC1O15118 1278 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 RNF113AO15541 343 aaKnown RBP4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 STX6O43752 255 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 PRAMEF2O60811 474 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 JRKO75564 520 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 SGPL1O95470 568 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 GAS8O95995 478 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 NPPAP01160 153 aa4.66□□□□□ -1.66
HMGB3P13-201ENST00000511263 ENO1P06733 434 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms