RNA–Protein interactions for RNA: ENST00000496805.5

PEF1-208, Transcript of penta-EF-hand domain containing 1, human

TSL 5

Gene PEF1, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PEF1-208	ENST00000496805	SLC6A18	Q96N87	628 aa		12.8	□□□□□ -0.36
PEF1-208	ENST00000496805	ELF4	Q99607	663 aa	Predicted RBP	12.8	□□□□□ -0.36
PEF1-208	ENST00000496805	MTG2	Q9H4K7	406 aa		12.8	□□□□□ -0.36
PEF1-208	ENST00000496805	DYRK4	Q9NR20	520 aa		12.8	□□□□□ -0.36
PEF1-208	ENST00000496805	GGT7	Q9UJ14	662 aa		12.8	□□□□□ -0.36
PEF1-208	ENST00000496805	PPM1H	Q9ULR3	514 aa		12.8	□□□□□ -0.36
PEF1-208	ENST00000496805	MAN2B2	Q9Y2E5	1009 aa		12.8	□□□□□ -0.36
PEF1-208	ENST00000496805	ACTL7B	Q9Y614	415 aa		12.8	□□□□□ -0.36
PEF1-208	ENST00000496805	FBN2	P35556	2912 aa		12.8	□□□□□ -0.36
PEF1-208	ENST00000496805	CSMD1	Q96PZ7	3565 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	ENO4	A6NNW6	628 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	SYNCRIP	O60506	623 aa	Known RBP	12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	RNASEH1	O60930	286 aa	Known RBP	12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	FSBP	O95073	299 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	ADH1B	P00325	375 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	MT-CO3	P00414	261 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	ITGB6	P18564	788 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	EPHA8	P29322	1005 aa	Predicted RBP	12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	VIPR1	P32241	457 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	SLC8A1	P32418	973 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	ABL2	P42684	1182 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	TEDDM1	Q5T9Z0	273 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	FAM46C	Q5VWP2	391 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	MRNIP	Q6NTE8	343 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	NEPRO	Q6NW34	567 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	ERAP2	Q6P179	960 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	PACS1	Q6VY07	963 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	DPPA4	Q7L190	304 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	PARS2	Q7L3T8	475 aa	Known RBP	12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	OR4K2	Q8NGD2	314 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	OR13C4	Q8NGS5	318 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	SGSM3	Q96HU1	749 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	RSPH9	Q9H1X1	276 aa	Predicted RBP	12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	ZFYVE1	Q9HBF4	777 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	PRSS16	Q9NQE7	514 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	IARS2	Q9NSE4	1012 aa	Known RBP	12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	OGFR	Q9NZT2	677 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	IL17C	Q9P0M4	197 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	B4GALT6	Q9UBX8	382 aa		12.79	□□□□□ -0.36
PEF1-208	ENST00000496805	CCDC162P	A2VCL2	907 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	CLEC18A	A5D8T8	446 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	C16orf96	A6NNT2	1141 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	AURKA	O14965	403 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	PIAS1	O75925	651 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	IL1B	P01584	269 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	ACADM	P11310	421 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	KRT15	P19012	456 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	OGN	P20774	298 aa	Known RBP	12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	LHCGR	P22888	699 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	CD27	P26842	260 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	SLC1A2	P43004	574 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	PSMD8	P48556	350 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	ARSD	P51689	593 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	NEK3	P51956	506 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	STC1	P52823	247 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	LIMK2	P53671	638 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	ELP6	Q0PNE2	266 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	BNIP3	Q12983	259 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	CDKN3	Q16667	212 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	AARS2	Q5JTZ9	985 aa	Known RBP	12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	RNF187	Q5TA31	235 aa	Predicted RBP	12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	GRTP1	Q5TC63	336 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	ZDHHC20	Q5W0Z9	365 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	LRRC66	Q68CR7	880 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	ZNF776	Q68DI1	518 aa	Predicted RBP	12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	CLEC18B	Q6UXF7	455 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	STRA8	Q7Z7C7	330 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	TRABD2A	Q86V40	505 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	RAVER1	Q8IY67	606 aa	Known RBP	12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	OTUD6B	Q8N6M0	293 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	CLEC18C	Q8NCF0	446 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	C2CD4A	Q8NCU7	369 aa	Predicted RBP	12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	GPR150	Q8NGU9	434 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	OR6P1	Q8NGX9	317 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	HDAC10	Q969S8	669 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	12.78	□□□□□ -0.36	4e-8	■■■■■ 70.2
PEF1-208	ENST00000496805	RAB7B	Q96AH8	199 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	MRRF	Q96E11	262 aa	Known RBP	12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	PSMG3-AS1	Q96PY0	264 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	SMIM14	Q96QK8	99 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	FAM129B	Q96TA1	746 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	RBBP8	Q99708	897 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	HDAC8	Q9BY41	377 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	PCED1A	Q9H1Q7	454 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	RHOJ	Q9H4E5	214 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	PCDH12	Q9NPG4	1184 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	RAD18	Q9NS91	495 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	CATSPERZ	Q9NTU4	200 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	IL1RAPL1	Q9NZN1	696 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	SLC17A6	Q9P2U8	582 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	TBK1	Q9UHD2	729 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	VPS9D1	Q9Y2B5	631 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	KCTD3	Q9Y597	815 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805	PSAT1	Q9Y617	370 aa		12.78	□□□□□ -0.36
PEF1-208	ENST00000496805		A0A1W2PNU3	283 aa	Predicted RBP	12.77	□□□□□ -0.37
PEF1-208	ENST00000496805	BLACE	A4D250	179 aa		12.77	□□□□□ -0.37
PEF1-208	ENST00000496805	PSMD11	O00231	422 aa		12.77	□□□□□ -0.37
PEF1-208	ENST00000496805	UGT1A9	O60656	530 aa		12.77	□□□□□ -0.37
PEF1-208	ENST00000496805	DXO	O77932	396 aa	Known RBP	12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms