RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 AKT1P31749 480 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 ELK3P41970 407 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 GRK6P43250 576 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 GNPDA1P46926 289 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 TTPAP49638 278 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 CDKN1CP49918 316 aaPredicted RBP14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 TUBB4BP68371 445 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 B4GALNT1Q00973 533 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 PDIA2Q13087 525 aaKnown RBP14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 CUL1Q13616 776 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 GTF2H3Q13889 308 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 LONRF1Q17RB8 773 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 TYSND1Q2T9J0 566 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 BCL7AQ4VC05 210 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 PRRT3Q5FWE3 981 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 CES3Q6UWW8 571 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 LRRTM4Q86VH4 590 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 ZNF547Q8IVP9 402 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 IGDCC3Q8IVU1 814 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 SLC25A45Q8N413 288 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 RASGEF1AQ8N9B8 481 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 GPBAR1Q8TDU6 330 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 TTC25Q96NG3 672 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 TTC1Q99614 292 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 TIMM29Q9BSF4 260 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 FAM96AQ9H5X1 160 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 PLAC1Q9HBJ0 212 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 ARFGAP3Q9NP61 516 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 NLGN3Q9NZ94 848 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 ZC3H7BQ9UGR2 993 aaKnown RBP14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 GPR34Q9UPC5 381 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 CHMP2BQ9UQN3 213 aa14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 PCYT1BQ9Y5K3 369 aaPredicted RBP14.74□□□□□ -0.05
CDC42SE1-203ENST00000470278 KLHL33A6NCF5 533 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 CD3EAPO15446 510 aaKnown RBP14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 AP2A2O94973 939 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 PRSS56P0CW18 603 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 GIMD1P0DJR0 217 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 CTSEP14091 401 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 OGNP20774 298 aaKnown RBP14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 ECHS1P30084 290 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 PPARGP37231 505 aaPredicted RBP14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 NSG1P42857 185 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 ILF3Q12906 894 aaKnown RBP eCLIP14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 BNIP3Q12983 259 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 SEMA3AQ14563 771 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 FASTKD3Q14CZ7 662 aaKnown RBP14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 ZNF648Q5T619 568 aaPredicted RBP14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 RNF187Q5TA31 235 aaPredicted RBP14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 MRNIPQ6NTE8 343 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 LVRNQ6Q4G3 990 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 CEP128Q6ZU80 1094 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 MARK2Q7KZI7 788 aaKnown RBP14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 TAS2R42Q7RTR8 314 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 RD3Q7Z3Z2 195 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 C11orf96Q7Z7L8 435 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 ZBED8Q8IZ13 594 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 OR4C6Q8NH72 309 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 LMX1AQ8TE12 382 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 DCUN1D1Q96GG9 259 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 LINC00615Q96LM1 132 aaPredicted RBP14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 DUSP23Q9BVJ7 150 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 GSDMCQ9BYG8 508 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 CLPBQ9H078 707 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 TSPYL1Q9H0U9 437 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 TMEM168Q9H0V1 697 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 UCKL1Q9NWZ5 548 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 MARCH4Q9P2E8 410 aaPredicted RBP14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 MOSPD1Q9UJG1 213 aa14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 TDRD6O60522 2096 aaKnown RBP14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 ZFC3H1O60293 1989 aaKnown RBP14.73□□□□□ -0.05
CDC42SE1-203ENST00000470278 GOLGA4Q13439 2230 aaKnown RBP14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 PRR19A6NJB7 356 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 SRRM3A6NNA2 597 aaPredicted RBP14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 TAF4O00268 1085 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 QSOX1O00391 747 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 KMOO15229 486 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 SGTAO43765 313 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 KCNJ13O60928 360 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 ALPPL2P10696 532 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 ATP1B2P14415 290 aaPredicted RBP14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 PRLHRP49683 370 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 CLCNKAP51800 687 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 CTSCP53634 463 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 ADARP55265 1226 aaKnown RBP14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 NEPROQ6NW34 567 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 UNC5AQ6ZN44 842 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 MICALCLQ6ZW33 695 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 GKN2Q86XP6 184 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 NRROSQ86YC3 692 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 GATAD2AQ86YP4 633 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 CILP2Q8IUL8 1156 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 TRAPPC5Q8IUR0 188 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 RELL1Q8IUW5 271 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 NAXDQ8IW45 347 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 IFT20Q8IY31 132 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 EIF1ADQ8N9N8 165 aaKnown RBP14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 FBXO36Q8NEA4 188 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 BAHD1Q8TBE0 780 aaPredicted RBP14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 CALML6Q8TD86 181 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms