RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 KRT14P02533 472 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 CAPNS1P04632 268 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 PSMA3P25788 255 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 PBLDP30039 288 aaPredicted RBP12.69□□□□□ -0.38
COL5A1-206ENST00000465877 GPR3P46089 330 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 PRLHRP49683 370 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 CDKN1CP49918 316 aaPredicted RBP12.69□□□□□ -0.38
COL5A1-206ENST00000465877 ARSDP51689 593 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 TERF1P54274 439 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 SESN2P58004 480 aaPredicted RBP12.69□□□□□ -0.38
COL5A1-206ENST00000465877 CACNG1Q06432 222 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 GPS1Q13098 491 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 KCNJ11Q14654 390 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 KIR2DS5Q14953 304 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 BCL7AQ4VC05 210 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 ZRANB3Q5FWF4 1079 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 FNBP1LQ5T0N5 605 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.69□□□□□ -0.38
COL5A1-206ENST00000465877 ZNF534Q76KX8 674 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 B3GNT8Q7Z7M8 397 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 SERPINA9Q86WD7 417 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 ZNF761Q86XN6 746 aaPredicted RBP12.69□□□□□ -0.38
COL5A1-206ENST00000465877 PROSER1Q86XN7 944 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 BEND7Q8N7W2 519 aaPredicted RBP12.69□□□□□ -0.38
COL5A1-206ENST00000465877 GRK7Q8WTQ7 553 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 NAT14Q8WUY8 206 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 ATXN7L3BQ96GX2 97 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 CDKN2AIPNLQ96HQ2 116 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 ZNF514Q96K75 400 aaPredicted RBP12.69□□□□□ -0.38
COL5A1-206ENST00000465877 CAPZA3Q96KX2 299 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 COPS8Q99627 209 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 ZMYND15Q9H091 742 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 DKK4Q9UBT3 224 aa12.69□□□□□ -0.38
COL5A1-206ENST00000465877 ATXN7L1Q9ULK2 861 aaPredicted RBP12.69□□□□□ -0.38
COL5A1-206ENST00000465877 TRBV23OR9-2A0A075B6M9 112 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 TCRBV7S3A2A0A539 114 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 OR51F1A6NGY5 319 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 OR5K4A6NMS3 321 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 CFAP99D6REC4 459 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 SGTAO43765 313 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 TMEM63AO94886 807 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 RALBP11234 206 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 ADRA1DP25100 572 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 RPL10P27635 214 aaKnown RBP12.68□□□□□ -0.38
COL5A1-206ENST00000465877 ALDH4A1P30038 563 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 FOXN2P32314 431 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 CSF2RBP32927 897 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 MAGEA6P43360 314 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 DRG2P55039 364 aaKnown RBP12.68□□□□□ -0.38
COL5A1-206ENST00000465877 OR1D5P58170 312 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 UBE2IP63279 158 aaKnown RBP12.68□□□□□ -0.38
COL5A1-206ENST00000465877 GABREP78334 506 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 CRADDP78560 199 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 CDK16Q00536 496 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 ACVR1Q04771 509 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 LAMB3Q13751 1172 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 RTP5Q14D33 572 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 SKIDA1Q1XH10 827 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 C3orf38Q5JPI3 329 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 TSTD2Q5T7W7 516 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 AGAP9Q5VTM2 703 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 PAPD7Q5XG87 772 aaKnown RBP12.68□□□□□ -0.38
COL5A1-206ENST00000465877 IYDQ6PHW0 289 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 TMEM220Q6QAJ8 160 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 AFTPHQ6ULP2 937 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 AMZ2Q86W34 360 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 PIANPQ8IYJ0 282 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 AVL9Q8NBF6 648 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 PEX13Q92968 403 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 GRAMD1AQ96CP6 724 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 SGF29Q96ES7 293 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 DCUN1D1Q96GG9 259 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 LIN37Q96GY3 246 aaPredicted RBP12.68□□□□□ -0.38
COL5A1-206ENST00000465877 ZNF778Q96MU6 729 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 FOXP3Q9BZS1 431 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 IL22Q9GZX6 179 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 DDX47Q9H0S4 455 aaKnown RBP12.68□□□□□ -0.38
COL5A1-206ENST00000465877 RDH14Q9HBH5 336 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 SYBUQ9NX95 663 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 ZDHHC3Q9NYG2 299 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 KCNK4Q9NYG8 393 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 SCHIP1Q9P0W5 487 aaPredicted RBP12.68□□□□□ -0.38
COL5A1-206ENST00000465877 CPNE7Q9UBL6 633 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 FAM8A1Q9UBU6 413 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 SLC2A6Q9UGQ3 507 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 RIMKLBQ9ULI2 386 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 ZMIZ1Q9ULJ6 1067 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 SATB2Q9UPW6 733 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 NEU2Q9Y3R4 380 aa12.68□□□□□ -0.38
COL5A1-206ENST00000465877 IGHV1OR21-1A0A087WYE8 117 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 A0A1W2PNU3 283 aaPredicted RBP12.67□□□□□ -0.38
COL5A1-206ENST00000465877 CCDC162PA2VCL2 907 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 CTAGE9A4FU28 777 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 AP3B1O00203 1094 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 ZW10O43264 779 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 B4GAT1O43505 415 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 DUX1O43812 170 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 BRINP1O60477 761 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 KCNJ13O60928 360 aa12.67□□□□□ -0.38
COL5A1-206ENST00000465877 CPNE6O95741 557 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms