RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 SDCCAG8Q86SQ7 713 aaPredicted RBP30.16■■■□□ 2.42
CSNK1E-206ENST00000413574 LRRTM4Q86VH4 590 aa30.16■■■□□ 2.42
CSNK1E-206ENST00000413574 UBXN4Q92575 508 aa30.16■■■□□ 2.42
CSNK1E-206ENST00000413574 SLC23A2Q9UGH3 650 aa30.16■■■□□ 2.42
CSNK1E-206ENST00000413574 GPR89AB7ZAQ6 455 aa30.15■■■□□ 2.42
CSNK1E-206ENST00000413574 CFAP99D6REC4 459 aa30.15■■■□□ 2.42
CSNK1E-206ENST00000413574 FAM153BP0C7A2 387 aa30.15■■■□□ 2.42
CSNK1E-206ENST00000413574 GPR89BP0CG08 455 aa30.15■■■□□ 2.42
CSNK1E-206ENST00000413574 ACP5P13686 325 aa30.15■■■□□ 2.42
CSNK1E-206ENST00000413574 SLC1A2P43004 574 aa30.15■■■□□ 2.42
CSNK1E-206ENST00000413574 CTBSQ01459 385 aa30.15■■■□□ 2.42
CSNK1E-206ENST00000413574 FAM153CQ494X1 144 aa30.15■■■□□ 2.42
CSNK1E-206ENST00000413574 ZNF789Q5FWF6 425 aa30.15■■■□□ 2.42
CSNK1E-206ENST00000413574 NRROSQ86YC3 692 aa30.15■■■□□ 2.42
CSNK1E-206ENST00000413574 HEXDCQ8WVB3 486 aa30.15■■■□□ 2.42
CSNK1E-206ENST00000413574 TTC1Q99614 292 aa30.15■■■□□ 2.42
CSNK1E-206ENST00000413574 LRRC4CQ9HCJ2 640 aa30.15■■■□□ 2.42
CSNK1E-206ENST00000413574 TRNAU1APQ9NX07 287 aaKnown RBP30.15■■■□□ 2.42
CSNK1E-206ENST00000413574 YKT6O15498 198 aa30.14■■■□□ 2.42
CSNK1E-206ENST00000413574 FFAR2O15552 330 aa30.14■■■□□ 2.42
CSNK1E-206ENST00000413574 NDUFS3O75489 264 aa30.14■■■□□ 2.42
CSNK1E-206ENST00000413574 PIAS1O75925 651 aa30.14■■■□□ 2.42
CSNK1E-206ENST00000413574 ZNF883P0CG24 379 aa30.14■■■□□ 2.42
CSNK1E-206ENST00000413574 NSG1P42857 185 aa30.14■■■□□ 2.42
CSNK1E-206ENST00000413574 TUBB4BP68371 445 aa30.14■■■□□ 2.42
CSNK1E-206ENST00000413574 TYSND1Q2T9J0 566 aa30.14■■■□□ 2.42
CSNK1E-206ENST00000413574 C3orf62Q6ZUJ4 267 aa30.14■■■□□ 2.42
CSNK1E-206ENST00000413574 C11orf96Q7Z7L8 435 aa30.14■■■□□ 2.42
CSNK1E-206ENST00000413574 FBXO6Q9NRD1 293 aaPredicted RBP30.14■■■□□ 2.42
CSNK1E-206ENST00000413574 ARID1BQ8NFD5 2236 aaPredicted RBP30.14■■■□□ 2.42
CSNK1E-206ENST00000413574 PCDHGA12O60330 932 aa30.14■■■□□ 2.41
CSNK1E-206ENST00000413574 OGNP20774 298 aaKnown RBP30.14■■■□□ 2.41
CSNK1E-206ENST00000413574 MPP1Q00013 466 aa30.14■■■□□ 2.41
CSNK1E-206ENST00000413574 KYNUQ16719 465 aa30.14■■■□□ 2.41
CSNK1E-206ENST00000413574 PACS1Q6VY07 963 aa30.14■■■□□ 2.41
CSNK1E-206ENST00000413574 MOCS1Q9NZB8 636 aa30.14■■■□□ 2.41
CSNK1E-206ENST00000413574 KCNK6Q9Y257 313 aa30.14■■■□□ 2.41
CSNK1E-206ENST00000413574 BTBD3Q9Y2F9 522 aa30.14■■■□□ 2.41
CSNK1E-206ENST00000413574 ARHGEF17Q96PE2 2063 aaPredicted RBP30.13■■■□□ 2.41
CSNK1E-206ENST00000413574 KMOO15229 486 aa30.13■■■□□ 2.41
CSNK1E-206ENST00000413574 GIMD1P0DJR0 217 aa30.13■■■□□ 2.41
CSNK1E-206ENST00000413574 CD59P13987 128 aa30.13■■■□□ 2.41
CSNK1E-206ENST00000413574 PPARGP37231 505 aaPredicted RBP30.13■■■□□ 2.41
CSNK1E-206ENST00000413574 NAA30Q147X3 362 aaPredicted RBP30.13■■■□□ 2.41
CSNK1E-206ENST00000413574 ELOCQ15369 112 aa30.13■■■□□ 2.41
CSNK1E-206ENST00000413574 DEFB133Q30KQ1 61 aa30.13■■■□□ 2.41
CSNK1E-206ENST00000413574 TAF8Q7Z7C8 310 aa30.13■■■□□ 2.41
CSNK1E-206ENST00000413574 GPBAR1Q8TDU6 330 aa30.13■■■□□ 2.41
CSNK1E-206ENST00000413574 FAM167BQ9BTA0 163 aa30.13■■■□□ 2.41
CSNK1E-206ENST00000413574 TSPYL1Q9H0U9 437 aa30.13■■■□□ 2.41
CSNK1E-206ENST00000413574 NINJ2Q9NZG7 142 aa30.13■■■□□ 2.41
CSNK1E-206ENST00000413574 GPR34Q9UPC5 381 aa30.13■■■□□ 2.41
CSNK1E-206ENST00000413574 CRYL1Q9Y2S2 319 aa30.13■■■□□ 2.41
CSNK1E-206ENST00000413574 UBA6A0AVT1 1052 aaPredicted RBP30.12■■■□□ 2.41
CSNK1E-206ENST00000413574 YY2O15391 372 aa30.12■■■□□ 2.41
CSNK1E-206ENST00000413574 S1PR4O95977 384 aa30.12■■■□□ 2.41
CSNK1E-206ENST00000413574 ZNF7P17097 686 aaPredicted RBP30.12■■■□□ 2.41
CSNK1E-206ENST00000413574 PBLDP30039 288 aaPredicted RBP30.12■■■□□ 2.41
CSNK1E-206ENST00000413574 FRG1Q14331 258 aaKnown RBP30.12■■■□□ 2.41
CSNK1E-206ENST00000413574 INSCQ1MX18 579 aa30.12■■■□□ 2.41
CSNK1E-206ENST00000413574 SLC30A9Q6PML9 568 aa30.12■■■□□ 2.41
CSNK1E-206ENST00000413574 FSTL5Q8N475 847 aaPredicted RBP30.12■■■□□ 2.41
CSNK1E-206ENST00000413574 CALML6Q8TD86 181 aa30.12■■■□□ 2.41
CSNK1E-206ENST00000413574 CDC42EP4Q9H3Q1 356 aaKnown RBP30.12■■■□□ 2.41
CSNK1E-206ENST00000413574 FBXO5Q9UKT4 447 aa30.12■■■□□ 2.41
CSNK1E-206ENST00000413574 DNAJC16Q9Y2G8 782 aa30.12■■■□□ 2.41
CSNK1E-206ENST00000413574 TCRBV9S1A1TA0A576 114 aa30.11■■■□□ 2.41
CSNK1E-206ENST00000413574 POP7O75817 140 aaKnown RBP30.11■■■□□ 2.41
CSNK1E-206ENST00000413574 VSNL1P62760 191 aa30.11■■■□□ 2.41
CSNK1E-206ENST00000413574 ILF3Q12906 894 aaKnown RBP eCLIP30.11■■■□□ 2.41
CSNK1E-206ENST00000413574 BCL7AQ4VC05 210 aa30.11■■■□□ 2.41
CSNK1E-206ENST00000413574 TEDDM1Q5T9Z0 273 aa30.11■■■□□ 2.41
CSNK1E-206ENST00000413574 RELL1Q8IUW5 271 aa30.11■■■□□ 2.41
CSNK1E-206ENST00000413574 LPGAT1Q92604 370 aa30.11■■■□□ 2.41
CSNK1E-206ENST00000413574 ZNF514Q96K75 400 aaPredicted RBP30.11■■■□□ 2.41
CSNK1E-206ENST00000413574 TCF12Q99081 682 aa30.11■■■□□ 2.41
CSNK1E-206ENST00000413574 VPS37BQ9H9H4 285 aa30.11■■■□□ 2.41
CSNK1E-206ENST00000413574 SMYD2Q9NRG4 433 aa30.11■■■□□ 2.41
CSNK1E-206ENST00000413574 KLC4Q9NSK0 619 aa30.11■■■□□ 2.41
CSNK1E-206ENST00000413574 FAM8A1Q9UBU6 413 aa30.11■■■□□ 2.41
CSNK1E-206ENST00000413574 TNFRSF8P28908 595 aa30.11■■■□□ 2.41
CSNK1E-206ENST00000413574 PRLHRP49683 370 aa30.11■■■□□ 2.41
CSNK1E-206ENST00000413574 EIF3BP55884 814 aaKnown RBP30.11■■■□□ 2.41
CSNK1E-206ENST00000413574 MGAT5Q09328 741 aa30.11■■■□□ 2.41
CSNK1E-206ENST00000413574 CEP128Q6ZU80 1094 aa30.11■■■□□ 2.41
CSNK1E-206ENST00000413574 LMNTD2Q8IXW0 634 aa30.11■■■□□ 2.41
CSNK1E-206ENST00000413574 P2RY12Q9H244 342 aa30.11■■■□□ 2.41
CSNK1E-206ENST00000413574 PCDHGB2Q9Y5G2 931 aa30.11■■■□□ 2.41
CSNK1E-206ENST00000413574 LMO7DNF2Z398 122 aa30.1■■■□□ 2.41
CSNK1E-206ENST00000413574 PRMT5O14744 637 aaPredicted RBP30.1■■■□□ 2.41
CSNK1E-206ENST00000413574 ACTR1BP42025 376 aa30.1■■■□□ 2.41
CSNK1E-206ENST00000413574 ACTR1AP61163 376 aa30.1■■■□□ 2.41
CSNK1E-206ENST00000413574 SLC14A1Q13336 389 aa30.1■■■□□ 2.41
CSNK1E-206ENST00000413574 CCNI2Q6ZMN8 369 aaPredicted RBP30.1■■■□□ 2.41
CSNK1E-206ENST00000413574 DBX2Q6ZNG2 339 aa30.1■■■□□ 2.41
CSNK1E-206ENST00000413574 CNTN4Q8IWV2 1026 aa30.1■■■□□ 2.41
CSNK1E-206ENST00000413574 EID2Q8N6I1 236 aa30.1■■■□□ 2.41
CSNK1E-206ENST00000413574 C2CD4AQ8NCU7 369 aaPredicted RBP30.1■■■□□ 2.41
CSNK1E-206ENST00000413574 GSDMCQ9BYG8 508 aa30.1■■■□□ 2.41
CSNK1E-206ENST00000413574 GULP1Q9UBP9 304 aa30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms