RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 K7ERI5 159 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 PDPK1O15530 556 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 AIREO43918 545 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 RAD17O75943 681 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 EPN2O95208 641 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 AHSGP02765 367 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 FTH1P02794 183 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 RAP2AP10114 183 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 MYCLP12524 364 aaPredicted RBP12.67□□□□□ -0.38
HERC3-203ENST00000407637 STMN1P16949 149 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 MLLT3P42568 568 aaPredicted RBP12.67□□□□□ -0.38
HERC3-203ENST00000407637 SNRPD2P62316 118 aaKnown RBP12.67□□□□□ -0.38
HERC3-203ENST00000407637 SP4Q02446 784 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 RAD51Q06609 339 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 FADDQ13158 208 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 CSHL1Q14406 222 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 DPYSL2Q16555 572 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 PAGE3Q5JUK9 113 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 JADE1Q6IE81 842 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 NIPA1Q7RTP0 329 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 EFL1Q7Z2Z2 1120 aaKnown RBP12.67□□□□□ -0.38
HERC3-203ENST00000407637 DENND6AQ8IWF6 608 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 PYROXD2Q8N2H3 581 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 FAM86B1Q8N7N1 296 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 SEPT1Q8WYJ6 367 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 MASTLQ96GX5 879 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 PDLIM7Q9NR12 457 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 DIABLOQ9NR28 239 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 INTS7Q9NVH2 962 aaKnown RBP12.67□□□□□ -0.38
HERC3-203ENST00000407637 KCNH4Q9UQ05 1017 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 QSER1Q2KHR3 1735 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 CLDN24A6NM45 220 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 A8MUA0 341 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 H0YCG3 227 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 KCNK1O00180 336 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 BBOX1O75936 387 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 SLITRK5O94991 958 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 CTBP1Q13363 440 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 EFR3AQ14156 821 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 DUOXA2Q1HG44 320 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 MTERF2Q49AM1 385 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 PID1Q7Z2X4 250 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 OR8H2Q8N162 312 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 CACTIN-AS1Q8N1I8 211 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 TMEM199Q8N511 208 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 ITFG1Q8TB96 612 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 ZFAND1Q8TCF1 268 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 SH3KBP1Q96B97 665 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 METTL2AQ96IZ6 378 aaKnown RBP12.67□□□□□ -0.38
HERC3-203ENST00000407637 OR2A14Q96R47 310 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 TNKS2Q9H2K2 1166 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 RNF167Q9H6Y7 350 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 CHST12Q9NRB3 414 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 UTS2RQ9UKP6 389 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 SHROOM3Q8TF72 1996 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 LINC00854A0A1B0GVQ3 168 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 SLC12A8A0AV02 714 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 OR6C70A6NIJ9 312 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 IPO13O94829 963 aaKnown RBP12.66□□□□□ -0.38
HERC3-203ENST00000407637 STBD1O95210 358 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 CYP2A6P11509 494 aaPredicted RBP12.66□□□□□ -0.38
HERC3-203ENST00000407637 GADD45AP24522 165 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 LIPAP38571 399 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 MLLT6P55198 1093 aaPredicted RBP12.66□□□□□ -0.38
HERC3-203ENST00000407637 IRF3Q14653 427 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 SMN1Q16637 294 aaKnown RBP12.66□□□□□ -0.38
HERC3-203ENST00000407637 C5orf22Q49AR2 442 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 AMIGO1Q86WK6 493 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 LILRB1Q8NHL6 650 aaPredicted RBP12.66□□□□□ -0.38
HERC3-203ENST00000407637 ACER1Q8TDN7 264 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 GSTO2Q9H4Y5 243 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 PCDHB14Q9Y5E9 798 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 HACD1B0YJ81 288 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 EEF2KO00418 725 aaKnown RBP12.66□□□□□ -0.38
HERC3-203ENST00000407637 PLK4O00444 970 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 AKR7A2O43488 359 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 TULP3O75386 442 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 CYP4B1P13584 511 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 ITGA2P17301 1181 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 SFNP31947 248 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 UGT2B10P36537 528 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 PTGER2P43116 358 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 RFX2P48378 723 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 CHRNB3Q05901 458 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 RPS6KA2Q15349 733 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 PLEKHG6Q3KR16 790 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 FAM98BQ52LJ0 330 aaKnown RBP12.66□□□□□ -0.38
HERC3-203ENST00000407637 SOWAHCQ53LP3 525 aaPredicted RBP12.66□□□□□ -0.38
HERC3-203ENST00000407637 SPANXN2Q5MJ10 180 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 BLOC1S3Q6QNY0 202 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 BNIPLQ7Z465 357 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 PROSER1Q86XN7 944 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 TP53INP2Q8IXH6 220 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 EID3Q8N140 333 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 DTWD1Q8N5C7 304 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 AMER2Q8N7J2 671 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 ZNF540Q8NDQ6 660 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 DEDD2Q8WXF8 326 aa12.66□□□□□ -0.38
HERC3-203ENST00000407637 RBM4BQ9BQ04 359 aaKnown RBP12.66□□□□□ -0.38
HERC3-203ENST00000407637 RBM4Q9BWF3 364 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms