RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 ALOX15P16050 662 aaPredicted RBP13.88□□□□□ -0.19
SCAF4-202ENST00000399804 ALDH9A1P49189 494 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 GTF2H2Q13888 395 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 NADSYN1Q6IA69 706 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 GTF2H2CQ6P1K8 395 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 PAOXQ6QHF9 649 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 KIAA1324Q6UXG2 1013 aaKnown RBP13.88□□□□□ -0.19
SCAF4-202ENST00000399804 CLHC1Q8NHS4 586 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 MAGEC3Q8TD91 643 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 CDK15Q96Q40 435 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 HCFC1R1Q9NWW0 138 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 ZNF490Q9ULM2 529 aaPredicted RBP13.88□□□□□ -0.19
SCAF4-202ENST00000399804 ZNF839A8K0R7 811 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 MATN2O00339 956 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 APODP05090 189 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 DHRS4L1P0CG22 281 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 UROSP10746 265 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 ZNF37AP17032 561 aaPredicted RBP13.88□□□□□ -0.19
SCAF4-202ENST00000399804 RALGDSQ12967 914 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 IYDQ6PHW0 289 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 CFAP206Q8IYR0 622 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 PEX13Q92968 403 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 CLP1Q92989 425 aaKnown RBP13.88□□□□□ -0.19
SCAF4-202ENST00000399804 TSSK3Q96PN8 268 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 RANBP9Q96S59 729 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 ADNPQ9H2P0 1102 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 B4GALT6Q9UBX8 382 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 WARS2Q9UGM6 360 aaKnown RBP13.88□□□□□ -0.19
SCAF4-202ENST00000399804 LIMD1Q9UGP4 676 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 AP4S1Q9Y587 144 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 SPO11Q9Y5K1 396 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 SLC28A1O00337 649 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 LRATO95237 230 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 PLCL1Q15111 1095 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 TMEM220Q6QAJ8 160 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 TAGAPQ8N103 731 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 GPR156Q8NFN8 814 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 BPIFB1Q8TDL5 484 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 KLF16Q9BXK1 252 aaPredicted RBP13.88□□□□□ -0.19
SCAF4-202ENST00000399804 SPHK2Q9NRA0 654 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 CLCA2Q9UQC9 943 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 TRIP12Q14669 1992 aaPredicted RBP13.87□□□□□ -0.19
SCAF4-202ENST00000399804 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.87□□□□□ -0.19
SCAF4-202ENST00000399804 GJB3O75712 270 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 KLKB1P03952 638 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 RPN2P04844 631 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 ATP6V1B2P21281 511 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 IFNA8P32881 189 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 CD70P32970 193 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 SLC26A3P40879 764 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 MAGEA3P43357 314 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 CDC16Q13042 620 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 OTUD3Q5T2D3 398 aaPredicted RBP13.87□□□□□ -0.19
SCAF4-202ENST00000399804 IL23RQ5VWK5 629 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 PSAPL1Q6NUJ1 521 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 FAM124AQ86V42 546 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 TREML1Q86YW5 311 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 AHI1Q8N157 1196 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 MIPOL1Q8TD10 442 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 NRBF2Q96F24 287 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 SLC22A12Q96S37 553 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 MGME1Q9BQP7 344 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 C1QTNF7Q9BXJ2 289 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 ZDHHC3Q9NYG2 299 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 INVSQ9Y283 1065 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 MAGEA13PA6NCF6 341 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 RNASEH2AO75792 299 aaKnown RBP13.87□□□□□ -0.19
SCAF4-202ENST00000399804 FSHRP23945 695 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 ADSLP30566 484 aaPredicted RBP13.87□□□□□ -0.19
SCAF4-202ENST00000399804 GNPDA1P46926 289 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 CDKN2DP55273 166 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 LRRC23Q53EV4 343 aaPredicted RBP13.87□□□□□ -0.19
SCAF4-202ENST00000399804 KCTD11Q693B1 232 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 BRAT1Q6PJG6 821 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 EPGNQ6UW88 154 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 Q6ZVL8 140 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 SORCS1Q8WY21 1168 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 DLG3Q92796 817 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 KIAA1191Q96A73 305 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 RIOK2Q9BVS4 552 aaKnown RBP13.87□□□□□ -0.19
SCAF4-202ENST00000399804 ALBP02768 609 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 ASLP04424 464 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 NTRK1P04629 796 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 COX7A2P14406 83 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 DNAJB1P25685 340 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 GPC1P35052 558 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 HNF1BP35680 557 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 RPL26P61254 145 aaKnown RBP13.87□□□□□ -0.19
SCAF4-202ENST00000399804 PLA2G4EQ3MJ16 856 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 PAGE2BQ5JRK9 111 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 PHYKPLQ8IUZ5 450 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 ARRDC2Q8TBH0 407 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 PYCR2Q96C36 320 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 TTLL2Q9BWV7 592 aa13.87□□□□□ -0.19
SCAF4-202ENST00000399804 TBC1D3DA0A087WVF3 549 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 TBC1D3IA0A087WXS9 549 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 TBC1D3EA0A087X179 549 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 TBC1D3KA0A087X1G2 549 aa13.86□□□□□ -0.19
SCAF4-202ENST00000399804 TBC1D3FA6NER0 549 aaPredicted RBP13.86□□□□□ -0.19
SCAF4-202ENST00000399804 TBC1D3LB9A6J9 549 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms