RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 RANBP3Q9H6Z4 567 aaPredicted RBP3.58□□□□□ -1.84
XRCC4-203ENST00000396027 RPF2Q9H7B2 306 aaKnown RBP3.58□□□□□ -1.84
XRCC4-203ENST00000396027 COG4Q9H9E3 785 aa3.58□□□□□ -1.84
XRCC4-203ENST00000396027 TRPV4Q9HBA0 871 aa3.58□□□□□ -1.84
XRCC4-203ENST00000396027 NANSQ9NR45 359 aa3.58□□□□□ -1.84
XRCC4-203ENST00000396027 MCUBQ9NWR8 336 aa3.58□□□□□ -1.84
XRCC4-203ENST00000396027 GGA3Q9NZ52 723 aa3.58□□□□□ -1.84
XRCC4-203ENST00000396027 PPP4R1LQ9P1A2 415 aa3.58□□□□□ -1.84
XRCC4-203ENST00000396027 KIF25Q9UIL4 384 aa3.58□□□□□ -1.84
XRCC4-203ENST00000396027 BTNL2Q9UIR0 455 aa3.58□□□□□ -1.84
XRCC4-203ENST00000396027 TRHDEQ9UKU6 1024 aa3.58□□□□□ -1.84
XRCC4-203ENST00000396027 ZBTB21Q9ULJ3 1066 aa3.58□□□□□ -1.84
XRCC4-203ENST00000396027 PPM1HQ9ULR3 514 aa3.58□□□□□ -1.84
XRCC4-203ENST00000396027 PLCL2Q9UPR0 1127 aa3.58□□□□□ -1.84
XRCC4-203ENST00000396027 MRPS7Q9Y2R9 242 aaKnown RBP3.58□□□□□ -1.84
XRCC4-203ENST00000396027 RIPK3Q9Y572 518 aa3.58□□□□□ -1.84
XRCC4-203ENST00000396027 TNPO3Q9Y5L0 923 aaKnown RBP3.58□□□□□ -1.84
XRCC4-203ENST00000396027 IFT172Q9UG01 1749 aa3.58□□□□□ -1.84
XRCC4-203ENST00000396027 SHPRHQ149N8 1683 aa3.58□□□□□ -1.84
XRCC4-203ENST00000396027 ZC3H13Q5T200 1668 aaKnown RBP3.58□□□□□ -1.84
XRCC4-203ENST00000396027 RIMS1Q86UR5 1692 aaKnown RBP3.58□□□□□ -1.84
XRCC4-203ENST00000396027 MADDQ8WXG6 1647 aa3.58□□□□□ -1.84
XRCC4-203ENST00000396027 CDC42BPGQ6DT37 1551 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 PFASO15067 1338 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 ASTN2O75129 1339 aaPredicted RBP3.57□□□□□ -1.84
XRCC4-203ENST00000396027 ITSN1Q15811 1721 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 MYOM1P52179 1685 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 C1orf167Q5SNV9 1468 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 PNMA6EA0A0J9YXQ4 647 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 A0A1W2PQ67 120 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 E2F8A0AVK6 867 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 DENND3A2RUS2 1198 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 CCDC182A6NF36 153 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 CCDC154A6NI56 674 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 METTL15A6NJ78 407 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 C12orf71A8MTZ7 269 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 PRR5-ARHGAP8B1AHC4 643 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 TSPAN4O14817 238 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 SCAMP3O14828 347 aaKnown RBP3.57□□□□□ -1.84
XRCC4-203ENST00000396027 ZNF185O15231 689 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 SIGLEC6O43699 453 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 CHP2O43745 196 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 BRINP1O60477 761 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 NBNO60934 754 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 UPK1BO75841 260 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 CELF2O95319 508 aaKnown RBP3.57□□□□□ -1.84
XRCC4-203ENST00000396027 PIGNO95427 931 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 NSA2O95478 260 aaKnown RBP3.57□□□□□ -1.84
XRCC4-203ENST00000396027 RAB3DO95716 219 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 TTC4O95801 387 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 MT-ND3P03897 115 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 URODP06132 367 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 LCKP06239 509 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 ASGR1P07306 291 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 GALTP07902 379 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 GJB1P08034 283 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 WEE2P0C1S8 567 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 TRIM49P0CI25 452 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 TRIM49CP0CI26 452 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 CYP2D6P10635 497 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 MBL2P11226 248 aaPredicted RBP3.57□□□□□ -1.84
XRCC4-203ENST00000396027 ICAM2P13598 275 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 HLA-EP13747 358 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 TCF4P15884 667 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 CTPS1P17812 591 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 ALOX12P18054 663 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 XRCC1P18887 633 aaPredicted RBP3.57□□□□□ -1.84
XRCC4-203ENST00000396027 TCN1P20061 433 aaPredicted RBP3.57□□□□□ -1.84
XRCC4-203ENST00000396027 PAX6P26367 422 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 PTBP1P26599 531 aaKnown RBP eCLIP3.57□□□□□ -1.84
XRCC4-203ENST00000396027 CALML3P27482 149 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 CHRNA5P30532 468 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 CTNNB1P35222 781 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 STAT5AP42229 794 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 SLC1A3P43003 542 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 RAD52P43351 418 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 HTR3AP46098 478 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 LIG4P49917 911 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 ARHGDIAP52565 204 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 SLC7A2P52569 658 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 RIDAP52758 137 aaKnown RBP3.57□□□□□ -1.84
XRCC4-203ENST00000396027 FCGRTP55899 365 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 NME5P56597 212 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 TAS2R60P59551 318 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 PSME3P61289 254 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 HNRNPKP61978 463 aaKnown RBP eCLIP3.57□□□□□ -1.84
XRCC4-203ENST00000396027 ASIC1P78348 528 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 ZNF200P98182 395 aaPredicted RBP3.57□□□□□ -1.84
XRCC4-203ENST00000396027 MPP1Q00013 466 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 DEFA6Q01524 100 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 CREMQ03060 361 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 MVKQ03426 396 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 GLO1Q04760 184 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 ZNF91Q05481 1191 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 PPATQ06203 517 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 RGS1Q08116 209 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 MAPK7Q13164 816 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 RRP1BQ14684 758 aaKnown RBP3.57□□□□□ -1.84
XRCC4-203ENST00000396027 SLC18A3Q16572 532 aa3.57□□□□□ -1.84
XRCC4-203ENST00000396027 CCDC142Q17RM4 750 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms