RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 TCAIMQ8N3R3 496 aa12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 ITFG1Q8TB96 612 aa12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 C12orf66Q96MD2 445 aa12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 KATNBL1Q9H079 304 aa12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 CARS2Q9HA77 564 aaKnown RBP12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 MYO18AQ92614 2054 aaKnown RBP12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 SIX3O95343 332 aaPredicted RBP12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 CLDN9O95484 217 aa12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 IDO1P14902 403 aa12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 MSX2P35548 267 aaPredicted RBP12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 RGS1Q08116 209 aa12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 ZC3H12BQ5HYM0 836 aaKnown RBP12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 ENPP7Q6UWV6 458 aa12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 FAM43BQ6ZT52 329 aaPredicted RBP12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 CHSY3Q70JA7 882 aa12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 NAT14Q8WUY8 206 aa12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 LEFTY1O75610 366 aa12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 SEC24AO95486 1093 aa12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 GJA8P48165 433 aa12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 DAB2P98082 770 aa12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 DSC3Q14574 896 aa12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 KLHL35Q6PF15 583 aa12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 ALKAL1Q6UXT8 129 aa12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 RP9Q8TA86 221 aaKnown RBP12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 SCAMP4Q969E2 229 aa12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 IL12RB2Q99665 862 aa12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 YIPF3Q9GZM5 350 aa12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 LINC00597Q9H2U6 94 aa12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 CCDC177Q9NQR7 707 aaPredicted RBP12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 FETUBQ9UGM5 382 aa12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 MTF2Q9Y483 593 aaPredicted RBP12.97□□□□□ -0.33
PTPRN2-202ENST00000389416 URADA6NGE7 173 aa12.96□□□□□ -0.33
PTPRN2-202ENST00000389416 SLC22A3O75751 556 aa12.96□□□□□ -0.33
PTPRN2-202ENST00000389416 AKT2P31751 481 aa12.96□□□□□ -0.33
PTPRN2-202ENST00000389416 IZUMO2Q6UXV1 221 aa12.96□□□□□ -0.33
PTPRN2-202ENST00000389416 STK32CQ86UX6 486 aa12.96□□□□□ -0.33
PTPRN2-202ENST00000389416 CYP4Z1Q86W10 505 aa12.96□□□□□ -0.33
PTPRN2-202ENST00000389416 C7orf26Q96N11 449 aa12.96□□□□□ -0.33
PTPRN2-202ENST00000389416 LRTM1Q9HBL6 345 aa12.96□□□□□ -0.33
PTPRN2-202ENST00000389416 EVPLQ92817 2033 aa12.96□□□□□ -0.33
PTPRN2-202ENST00000389416 HNRNPCL2B2RXH8 293 aa12.96□□□□□ -0.33
PTPRN2-202ENST00000389416 DEAF1O75398 565 aaPredicted RBP12.96□□□□□ -0.33
PTPRN2-202ENST00000389416 EPOP01588 193 aa12.96□□□□□ -0.33
PTPRN2-202ENST00000389416 VIPR1P32241 457 aa12.96□□□□□ -0.33
PTPRN2-202ENST00000389416 GRIA3P42263 894 aa12.96□□□□□ -0.33
PTPRN2-202ENST00000389416 GTF2H2Q13888 395 aa12.96□□□□□ -0.33
PTPRN2-202ENST00000389416 DHCR24Q15392 516 aa12.96□□□□□ -0.33
PTPRN2-202ENST00000389416 ZNF776Q68DI1 518 aaPredicted RBP12.96□□□□□ -0.33
PTPRN2-202ENST00000389416 GTF2H2CQ6P1K8 395 aa12.96□□□□□ -0.33
PTPRN2-202ENST00000389416 OR6Y1Q8NGX8 325 aa12.96□□□□□ -0.33
PTPRN2-202ENST00000389416 NPAS2Q99743 824 aa12.96□□□□□ -0.33
PTPRN2-202ENST00000389416 TRIT1Q9H3H1 467 aaKnown RBP12.96□□□□□ -0.33
PTPRN2-202ENST00000389416 RFXANKO14593 260 aa12.96□□□□□ -0.34
PTPRN2-202ENST00000389416 LDLRP01130 860 aa12.96□□□□□ -0.34
PTPRN2-202ENST00000389416 HOXD8P13378 290 aaPredicted RBP12.96□□□□□ -0.34
PTPRN2-202ENST00000389416 GSSP48637 474 aa12.96□□□□□ -0.34
PTPRN2-202ENST00000389416 CENPAP49450 140 aa12.96□□□□□ -0.34
PTPRN2-202ENST00000389416 KLF10Q13118 480 aa12.96□□□□□ -0.34
PTPRN2-202ENST00000389416 GK5Q6ZS86 529 aa12.96□□□□□ -0.34
PTPRN2-202ENST00000389416 APCDD1Q8J025 514 aa12.96□□□□□ -0.34
PTPRN2-202ENST00000389416 USP7Q93009 1102 aa12.96□□□□□ -0.34
PTPRN2-202ENST00000389416 OSBPL6Q9BZF3 934 aa12.96□□□□□ -0.34
PTPRN2-202ENST00000389416 WDR6Q9NNW5 1121 aaKnown RBP12.96□□□□□ -0.34
PTPRN2-202ENST00000389416 COLEC10Q9Y6Z7 277 aa12.96□□□□□ -0.34
PTPRN2-202ENST00000389416 H3BQ06 376 aaPredicted RBP12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 OR10H2O60403 315 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 SERPINI2O75830 405 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 CHRNGP07510 517 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 OCM2P0CE71 109 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 OCMP0CE72 109 aaPredicted RBP12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 FOXN2P32314 431 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 IL23RQ5VWK5 629 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 PAQR9Q6ZVX9 377 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 CLNKQ7Z7G1 428 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 ARFGAP1Q8N6T3 406 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 LINC01465Q8N7H1 131 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 BHLHE22Q8NFJ8 381 aaPredicted RBP12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 IMP4Q96G21 291 aaKnown RBP12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 ARL8BQ9NVJ2 186 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 SCN3BQ9NY72 215 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 RPS6KB2Q9UBS0 482 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 TEKT2Q9UIF3 430 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 CFAP20Q9Y6A4 193 aaKnown RBP12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 A0A0J9YYE9 177 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 HNRNPRO43390 633 aaKnown RBP12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 WASHC2DQ5SRD0 308 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 SULT1C3Q6IMI6 304 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 CCDC81Q6ZN84 652 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 ZC3H7AQ8IWR0 971 aaKnown RBP12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 B4GALNT2Q8NHY0 566 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 ACTRT2Q8TDY3 377 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 ZNF514Q96K75 400 aaPredicted RBP12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 CCT7Q99832 543 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 SSU72Q9NP77 194 aaKnown RBP12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 ADPRHL2Q9NX46 363 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 BCORQ6W2J9 1755 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 ATP6V1G2O95670 118 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 NUDT14O95848 222 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 TOP3BO95985 862 aaKnown RBP12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 PAK4O96013 591 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms