RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 RAVER1Q8IY67 606 aaKnown RBP14.54□□□□□ -0.08
CXCL12-201ENST00000343575 CENPLQ8N0S6 344 aaPredicted RBP14.54□□□□□ -0.08
CXCL12-201ENST00000343575 C10orf82Q8WW14 230 aa14.54□□□□□ -0.08
CXCL12-201ENST00000343575 SPATA16Q9BXB7 569 aa14.54□□□□□ -0.08
CXCL12-201ENST00000343575 FAM192AQ9GZU8 254 aa14.54□□□□□ -0.08
CXCL12-201ENST00000343575 LMAN1LQ9HAT1 526 aa14.54□□□□□ -0.08
CXCL12-201ENST00000343575 HAO1Q9UJM8 370 aa14.54□□□□□ -0.08
CXCL12-201ENST00000343575 PLLPQ9Y342 182 aa14.54□□□□□ -0.08
CXCL12-201ENST00000343575 KANSL1LA0AUZ9 987 aa14.53□□□□□ -0.08
CXCL12-201ENST00000343575 K7ESM1 405 aa14.53□□□□□ -0.08
CXCL12-201ENST00000343575 COPEO14579 308 aa14.53□□□□□ -0.08
CXCL12-201ENST00000343575 DHRS4L1P0CG22 281 aa14.53□□□□□ -0.08
CXCL12-201ENST00000343575 STMN1P16949 149 aa14.53□□□□□ -0.08
CXCL12-201ENST00000343575 KHDC1Q4VXA5 237 aaKnown RBP14.53□□□□□ -0.08
CXCL12-201ENST00000343575 HHATQ5VTY9 493 aa14.53□□□□□ -0.08
CXCL12-201ENST00000343575 NRSN1Q8IZ57 195 aa14.53□□□□□ -0.08
CXCL12-201ENST00000343575 SIX5Q8N196 739 aa14.53□□□□□ -0.08
CXCL12-201ENST00000343575 TRAM1L1Q8N609 369 aa14.53□□□□□ -0.08
CXCL12-201ENST00000343575 CLDN19Q8N6F1 224 aa14.53□□□□□ -0.08
CXCL12-201ENST00000343575 SIPA1Q96FS4 1042 aa14.53□□□□□ -0.08
CXCL12-201ENST00000343575 GPR78Q96P69 363 aa14.53□□□□□ -0.08
CXCL12-201ENST00000343575 SLC30A3Q99726 388 aa14.53□□□□□ -0.08
CXCL12-201ENST00000343575 CDH19Q9H159 772 aa14.53□□□□□ -0.08
CXCL12-201ENST00000343575 VPS11Q9H270 941 aa14.53□□□□□ -0.08
CXCL12-201ENST00000343575 SMOXQ9NWM0 555 aa14.53□□□□□ -0.08
CXCL12-201ENST00000343575 CRLS1Q9UJA2 301 aa14.53□□□□□ -0.08
CXCL12-201ENST00000343575 ZFP69BQ9UJL9 534 aa14.53□□□□□ -0.08
CXCL12-201ENST00000343575 ZFR2Q9UPR6 939 aaKnown RBP14.53□□□□□ -0.08
CXCL12-201ENST00000343575 PIKFYVEQ9Y2I7 2098 aa14.53□□□□□ -0.08
CXCL12-201ENST00000343575 TCRBV21S2A2A0A5A6 115 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 IGLON5A6NGN9 336 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 IQCF5A8MTL0 148 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 CHURC1-FNTBB4DL54 471 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 NEMP1O14524 444 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 PLRG1O43660 514 aaKnown RBP14.52□□□□□ -0.08
CXCL12-201ENST00000343575 DNTTP04053 509 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 MPOP05164 745 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 T-ENOLP0DO92 83 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 PKMP14618 531 aaKnown RBP14.52□□□□□ -0.08
CXCL12-201ENST00000343575 SH3BGRP55822 239 aaPredicted RBP14.52□□□□□ -0.08
CXCL12-201ENST00000343575 DYNC1I2Q13409 638 aaKnown RBP14.52□□□□□ -0.08
CXCL12-201ENST00000343575 FGL2Q14314 439 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 CCDC6Q16204 474 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 GSTA3Q16772 222 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 GPRC6AQ5T6X5 926 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 SEL1L3Q68CR1 1132 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 FAM45BPQ6NSW5 357 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 C16orf46Q6P387 395 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 FAM47EQ6ZV65 393 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 ARHGAP24Q8N264 748 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 TMEM151AQ8N4L1 468 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 PPFIBP2Q8ND30 876 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 FAM45AQ8TCE6 357 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 ANKRD49Q8WVL7 239 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 FAM136AQ96C01 138 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 UBXN10Q96LJ8 280 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 FAM111AQ96PZ2 611 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 TMEM216Q9P0N5 145 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 EBF1Q9UH73 591 aa14.52□□□□□ -0.08
CXCL12-201ENST00000343575 CNOT6Q9ULM6 557 aaKnown RBP14.52□□□□□ -0.08
CXCL12-201ENST00000343575 PRMT5O14744 637 aaPredicted RBP14.52□□□□□ -0.09
CXCL12-201ENST00000343575 TSPAN6O43657 245 aa14.52□□□□□ -0.09
CXCL12-201ENST00000343575 NIPSNAP2O75323 286 aa14.52□□□□□ -0.09
CXCL12-201ENST00000343575 RPS3P23396 243 aaKnown RBP eCLIP14.52□□□□□ -0.09
CXCL12-201ENST00000343575 ADPRHP54922 357 aa14.52□□□□□ -0.09
CXCL12-201ENST00000343575 ZBTB16Q05516 673 aa14.52□□□□□ -0.09
CXCL12-201ENST00000343575 ITGA9Q13797 1035 aa14.52□□□□□ -0.09
CXCL12-201ENST00000343575 UBXN2BQ14CS0 331 aa14.52□□□□□ -0.09
CXCL12-201ENST00000343575 TMEM154Q6P9G4 183 aa14.52□□□□□ -0.09
CXCL12-201ENST00000343575 SYT13Q7L8C5 426 aa14.52□□□□□ -0.09
CXCL12-201ENST00000343575 SYNPOQ8N3V7 929 aa14.52□□□□□ -0.09
CXCL12-201ENST00000343575 SPATA6LQ8N4H0 392 aa14.52□□□□□ -0.09
CXCL12-201ENST00000343575 FLCNQ8NFG4 579 aa14.52□□□□□ -0.09
CXCL12-201ENST00000343575 KCTD4Q8WVF5 259 aa14.52□□□□□ -0.09
CXCL12-201ENST00000343575 AP2M1Q96CW1 435 aa14.52□□□□□ -0.09
CXCL12-201ENST00000343575 DTNBP1Q96EV8 351 aa14.52□□□□□ -0.09
CXCL12-201ENST00000343575 PAIP2Q9BPZ3 127 aaKnown RBP14.52□□□□□ -0.09
CXCL12-201ENST00000343575 ZSCAN5AQ9BUG6 496 aa14.52□□□□□ -0.09
CXCL12-201ENST00000343575 ZDHHC3Q9NYG2 299 aa14.52□□□□□ -0.09
CXCL12-201ENST00000343575 PDP2Q9P2J9 529 aa14.52□□□□□ -0.09
CXCL12-201ENST00000343575 FBXL21Q9UKT6 434 aa14.52□□□□□ -0.09
CXCL12-201ENST00000343575 VPS9D1Q9Y2B5 631 aa14.52□□□□□ -0.09
CXCL12-201ENST00000343575 EME2A4GXA9 379 aaPredicted RBP14.51□□□□□ -0.09
CXCL12-201ENST00000343575 FAM170BA6NMN3 283 aa14.51□□□□□ -0.09
CXCL12-201ENST00000343575 TM9SF1O15321 606 aa14.51□□□□□ -0.09
CXCL12-201ENST00000343575 SGTAO43765 313 aa14.51□□□□□ -0.09
CXCL12-201ENST00000343575 MTX2O75431 263 aa14.51□□□□□ -0.09
CXCL12-201ENST00000343575 SBK3P0C264 359 aa14.51□□□□□ -0.09
CXCL12-201ENST00000343575 CRABP2P29373 138 aa14.51□□□□□ -0.09
CXCL12-201ENST00000343575 DPTQ07507 201 aa14.51□□□□□ -0.09
CXCL12-201ENST00000343575 TMEM31Q5JXX7 168 aa14.51□□□□□ -0.09
CXCL12-201ENST00000343575 N4BP2L1Q5TBK1 243 aaPredicted RBP14.51□□□□□ -0.09
CXCL12-201ENST00000343575 LVRNQ6Q4G3 990 aa14.51□□□□□ -0.09
CXCL12-201ENST00000343575 TRIM67Q6ZTA4 783 aa14.51□□□□□ -0.09
CXCL12-201ENST00000343575 RAPH1Q70E73 1250 aa14.51□□□□□ -0.09
CXCL12-201ENST00000343575 ZNF765Q7L2R6 523 aa14.51□□□□□ -0.09
CXCL12-201ENST00000343575 RBFAQ8N0V3 343 aa14.51□□□□□ -0.09
CXCL12-201ENST00000343575 LKAAEAR1Q8TD35 194 aa14.51□□□□□ -0.09
CXCL12-201ENST00000343575 CXorf40AQ8TE69 158 aa14.51□□□□□ -0.09
CXCL12-201ENST00000343575 BTN2A2Q8WVV5 523 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms