RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 HDAC7Q8WUI4 952 aa16.27■□□□□ 0.2
PTCH1-201ENST00000331920 BEX3Q00994 111 aa16.27■□□□□ 0.2
PTCH1-201ENST00000331920 TMEM17Q86X19 198 aa16.27■□□□□ 0.2
PTCH1-201ENST00000331920 MFSD14AQ96MC6 490 aa16.27■□□□□ 0.2
PTCH1-201ENST00000331920 RTKNQ9BST9 563 aa16.27■□□□□ 0.2
PTCH1-201ENST00000331920 RRAGCQ9HB90 399 aa16.27■□□□□ 0.2
PTCH1-201ENST00000331920 POLR3BQ9NW08 1133 aaPredicted RBP16.27■□□□□ 0.2
PTCH1-201ENST00000331920 COLEC10Q9Y6Z7 277 aa16.27■□□□□ 0.2
PTCH1-201ENST00000331920 NDUFA9Q16795 377 aa16.27■□□□□ 0.2
PTCH1-201ENST00000331920 CYP27C1Q4G0S4 372 aa16.27■□□□□ 0.2
PTCH1-201ENST00000331920 C1orf94Q6P1W5 598 aa16.27■□□□□ 0.2
PTCH1-201ENST00000331920 ASB18Q6ZVZ8 466 aa16.27■□□□□ 0.2
PTCH1-201ENST00000331920 ZCCHC9Q8N567 271 aaKnown RBP16.27■□□□□ 0.2
PTCH1-201ENST00000331920 PHC3Q8NDX5 983 aa16.27■□□□□ 0.2
PTCH1-201ENST00000331920 RBM4BQ9BQ04 359 aaKnown RBP16.27■□□□□ 0.2
PTCH1-201ENST00000331920 RBM4Q9BWF3 364 aaKnown RBP16.27■□□□□ 0.2
PTCH1-201ENST00000331920 CITO14578 2027 aa16.27■□□□□ 0.2
PTCH1-201ENST00000331920 FGF10O15520 208 aaPredicted RBP16.27■□□□□ 0.2
PTCH1-201ENST00000331920 IL33O95760 270 aa16.27■□□□□ 0.2
PTCH1-201ENST00000331920 BATFQ16520 125 aa16.27■□□□□ 0.2
PTCH1-201ENST00000331920 ELOA2Q8IYF1 753 aaPredicted RBP16.27■□□□□ 0.2
PTCH1-201ENST00000331920 PIGXQ8TBF5 258 aa16.27■□□□□ 0.2
PTCH1-201ENST00000331920 HDAC10Q969S8 669 aa16.27■□□□□ 0.2
PTCH1-201ENST00000331920 CIB1Q99828 191 aa16.27■□□□□ 0.2
PTCH1-201ENST00000331920 PTPRKQ15262 1439 aa16.27■□□□□ 0.19
PTCH1-201ENST00000331920 WASHC1A8K0Z3 465 aa16.27■□□□□ 0.19
PTCH1-201ENST00000331920 AKAP3O75969 853 aa16.27■□□□□ 0.19
PTCH1-201ENST00000331920 EFNA1P20827 205 aaPredicted RBP16.27■□□□□ 0.19
PTCH1-201ENST00000331920 WASH2PQ6VEQ5 465 aa16.27■□□□□ 0.19
PTCH1-201ENST00000331920 STOML3Q8TAV4 291 aa16.27■□□□□ 0.19
PTCH1-201ENST00000331920 NPC1L1Q9UHC9 1359 aa16.27■□□□□ 0.19
PTCH1-201ENST00000331920 ZNF609O15014 1411 aa16.27■□□□□ 0.19
PTCH1-201ENST00000331920 PLK4O00444 970 aa16.27■□□□□ 0.19
PTCH1-201ENST00000331920 OR4L1Q8NH43 312 aa16.27■□□□□ 0.19
PTCH1-201ENST00000331920 MFHAS1Q9Y4C4 1052 aa16.27■□□□□ 0.19
PTCH1-201ENST00000331920 TRPV2Q9Y5S1 764 aa16.27■□□□□ 0.19
PTCH1-201ENST00000331920 KDM5CP41229 1560 aa16.27■□□□□ 0.19
PTCH1-201ENST00000331920 COL6A1P12109 1028 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 MAGEA6P43360 314 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 VMACQ2NL98 169 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 KCTD9Q7L273 389 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 GNG13Q9P2W3 67 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 ZNF726A6NNF4 738 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 RHPN2P1A8MT19 583 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 J3QRK9 145 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 REM1O75628 298 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 TRAPPC6AO75865 159 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 CSTBP04080 98 aaKnown RBP16.26■□□□□ 0.19
PTCH1-201ENST00000331920 KCNJ2P63252 427 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 OC90Q02509 493 aaPredicted RBP16.26■□□□□ 0.19
PTCH1-201ENST00000331920 AIMP2Q13155 320 aaKnown RBP16.26■□□□□ 0.19
PTCH1-201ENST00000331920 MSANTD2Q6P1R3 559 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 TMEM192Q8IY95 271 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 ACOT12Q8WYK0 555 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 DPEP2Q9H4A9 486 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 CCSER2Q9H7U1 834 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 IFNA21P01568 189 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 CCKBRP32239 447 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 AVPR1BP47901 424 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 ECH1Q13011 328 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 WSCD1Q658N2 575 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 GRHL2Q6ISB3 625 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 ZNF720Q7Z2F6 126 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 ANKRD46Q86W74 232 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 UFD1Q92890 307 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 ZDHHC15Q96MV8 337 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 IFT27Q9BW83 186 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 SEC61A2Q9H9S3 476 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 SPATA7Q9P0W8 599 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 PLAGL2Q9UPG8 496 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 PITPNM1O00562 1244 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 RPL5P46777 297 aaKnown RBP16.26■□□□□ 0.19
PTCH1-201ENST00000331920 CLCN5P51795 746 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 XKR4Q5GH76 650 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 ATAD3CQ5T2N8 411 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 PLPP4Q5VZY2 271 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 ADAMTSL2Q86TH1 951 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 OR5T1Q8NG75 326 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 GAD1Q99259 594 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 UCK2Q9BZX2 261 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 RNF208Q9H0X6 261 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 KCNS2Q9ULS6 477 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 C14orf166Q9Y224 244 aaKnown RBP16.26■□□□□ 0.19
PTCH1-201ENST00000331920 hCG_2039718K7EN88 272 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 RNASEH2AO75792 299 aaKnown RBP16.26■□□□□ 0.19
PTCH1-201ENST00000331920 PLEKHG4Q58EX7 1191 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 OR14C36Q8NHC7 312 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 ETNPPLQ8TBG4 499 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 MND1Q9BWT6 205 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 LRMDAQ9H2I8 198 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 CENPMQ9NSP4 180 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 MTMR10Q9NXD2 777 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 MYO5CQ9NQX4 1742 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 NME6O75414 186 aaPredicted RBP16.26■□□□□ 0.19
PTCH1-201ENST00000331920 RPS9P46781 194 aaKnown RBP16.26■□□□□ 0.19
PTCH1-201ENST00000331920 FBXO48Q5FWF7 155 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 ZDHHC20Q5W0Z9 365 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 SMARCD2Q92925 531 aa16.26■□□□□ 0.19
PTCH1-201ENST00000331920 RBM18Q96H35 190 aaKnown RBP16.26■□□□□ 0.19
PTCH1-201ENST00000331920 SH3BGRL2Q9UJC5 107 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms