RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 ULK4Q96C45 1275 aa27.18■■□□□ 1.94
ATPAF1-201ENST00000329231 ZMYND15Q9H091 742 aa27.18■■□□□ 1.94
ATPAF1-201ENST00000329231 WASH6PQ9NQA3 447 aa27.18■■□□□ 1.94
ATPAF1-201ENST00000329231 ZKSCAN5Q9Y2L8 839 aa27.18■■□□□ 1.94
ATPAF1-201ENST00000329231 ZSCAN12O43309 604 aa27.17■■□□□ 1.94
ATPAF1-201ENST00000329231 DUX1O43812 170 aa27.17■■□□□ 1.94
ATPAF1-201ENST00000329231 TPH1P17752 444 aa27.17■■□□□ 1.94
ATPAF1-201ENST00000329231 ITGALP20701 1170 aa27.17■■□□□ 1.94
ATPAF1-201ENST00000329231 CTSCP53634 463 aa27.17■■□□□ 1.94
ATPAF1-201ENST00000329231 EPHA4P54764 986 aa27.17■■□□□ 1.94
ATPAF1-201ENST00000329231 TRA2AQ13595 282 aaKnown RBP eCLIP27.17■■□□□ 1.94
ATPAF1-201ENST00000329231 SEPT7Q16181 437 aaKnown RBP27.17■■□□□ 1.94
ATPAF1-201ENST00000329231 AGAP9Q5VTM2 703 aa27.17■■□□□ 1.94
ATPAF1-201ENST00000329231 ABRAXAS1Q6UWZ7 409 aa27.17■■□□□ 1.94
ATPAF1-201ENST00000329231 ZNF574Q6ZN55 896 aaPredicted RBP27.17■■□□□ 1.94
ATPAF1-201ENST00000329231 CLEC14AQ86T13 490 aa27.17■■□□□ 1.94
ATPAF1-201ENST00000329231 ETNK1Q9HBU6 452 aa27.17■■□□□ 1.94
ATPAF1-201ENST00000329231 CRLS1Q9UJA2 301 aa27.17■■□□□ 1.94
ATPAF1-201ENST00000329231 CELSR3Q9NYQ7 3312 aa27.17■■□□□ 1.94
ATPAF1-201ENST00000329231 IGHV5-10-1A0A0J9YXX1 117 aa27.16■■□□□ 1.94
ATPAF1-201ENST00000329231 OR2AG2A6NM03 316 aa27.16■■□□□ 1.94
ATPAF1-201ENST00000329231 E7EVH7 732 aa27.16■■□□□ 1.94
ATPAF1-201ENST00000329231 HGSO14964 777 aaPredicted RBP27.16■■□□□ 1.94
ATPAF1-201ENST00000329231 POP7O75817 140 aaKnown RBP27.16■■□□□ 1.94
ATPAF1-201ENST00000329231 FGGP02679 453 aa27.16■■□□□ 1.94
ATPAF1-201ENST00000329231 ITPKBP27987 946 aa27.16■■□□□ 1.94
ATPAF1-201ENST00000329231 LMAN1P49257 510 aa27.16■■□□□ 1.94
ATPAF1-201ENST00000329231 LIMK2P53671 638 aa27.16■■□□□ 1.94
ATPAF1-201ENST00000329231 UBE2IP63279 158 aaKnown RBP27.16■■□□□ 1.94
ATPAF1-201ENST00000329231 SEPT6Q14141 434 aa27.16■■□□□ 1.94
ATPAF1-201ENST00000329231 SIX1Q15475 284 aaPredicted RBP27.16■■□□□ 1.94
ATPAF1-201ENST00000329231 DRICH1Q6PGQ1 229 aaPredicted RBP27.16■■□□□ 1.94
ATPAF1-201ENST00000329231 SNX20Q7Z614 316 aa27.16■■□□□ 1.94
ATPAF1-201ENST00000329231 TRIM48Q8IWZ4 208 aa27.16■■□□□ 1.94
ATPAF1-201ENST00000329231 CCDC97Q96F63 343 aaPredicted RBP27.16■■□□□ 1.94
ATPAF1-201ENST00000329231 SCHIP1Q9P0W5 487 aaPredicted RBP27.16■■□□□ 1.94
ATPAF1-201ENST00000329231 PISDQ9UG56 409 aa27.16■■□□□ 1.94
ATPAF1-201ENST00000329231 SLC30A1Q9Y6M5 507 aa27.16■■□□□ 1.94
ATPAF1-201ENST00000329231 AGAP14A8MT82 685 aa27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 CEP104O60308 925 aa27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 GAS8O95995 478 aa27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 VIPP01282 170 aa27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 HGFP14210 728 aa27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 HOXB3P14651 431 aaPredicted RBP27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 RPL10P27635 214 aaKnown RBP27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 CSF2RBP32927 897 aa27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 CFHR1Q03591 330 aa27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 DMPKQ09013 629 aa27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 POU6F1Q14863 301 aa27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 TMEM71Q6P5X7 295 aa27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 KCNE4Q8WWG9 221 aa27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 DCUN1D1Q96GG9 259 aa27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 NAF1Q96HR8 494 aaKnown RBP27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 DNAJC1Q96KC8 554 aaKnown RBP27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 CCDC74BQ96LY2 380 aa27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 EPB41L1Q9H4G0 881 aa27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 UCK1Q9HA47 277 aa27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 NLE1Q9NVX2 485 aaPredicted RBP27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 PIH1D1Q9NWS0 290 aaKnown RBP27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 PAK5Q9P286 719 aa27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 DRG1Q9Y295 367 aaKnown RBP27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 PCDHGA7Q9Y5G6 932 aa27.15■■□□□ 1.94
ATPAF1-201ENST00000329231 CFAP47Q6ZTR5 3102 aa27.14■■□□□ 1.94
ATPAF1-201ENST00000329231 RALBP11234 206 aa27.14■■□□□ 1.94
ATPAF1-201ENST00000329231 CDH17Q12864 832 aa27.14■■□□□ 1.94
ATPAF1-201ENST00000329231 C16orf72Q14CZ0 275 aa27.14■■□□□ 1.94
ATPAF1-201ENST00000329231 GPR33Q49SQ1 333 aa27.14■■□□□ 1.94
ATPAF1-201ENST00000329231 FNBP1LQ5T0N5 605 aa27.14■■□□□ 1.94
ATPAF1-201ENST00000329231 WDR74Q6RFH5 385 aaPredicted RBP27.14■■□□□ 1.94
ATPAF1-201ENST00000329231 JAMLQ86YT9 394 aa27.14■■□□□ 1.94
ATPAF1-201ENST00000329231 REXO1L1PQ8IX06 675 aa27.14■■□□□ 1.94
ATPAF1-201ENST00000329231 SPACA3Q8IXA5 215 aa27.14■■□□□ 1.94
ATPAF1-201ENST00000329231 DNAAF3Q8N9W5 541 aa27.14■■□□□ 1.94
ATPAF1-201ENST00000329231 STYXQ8WUJ0 223 aa27.14■■□□□ 1.94
ATPAF1-201ENST00000329231 HEXDCQ8WVB3 486 aa27.14■■□□□ 1.94
ATPAF1-201ENST00000329231 DPH1Q9BZG8 443 aa27.14■■□□□ 1.94
ATPAF1-201ENST00000329231 RAB6BQ9NRW1 208 aa27.14■■□□□ 1.94
ATPAF1-201ENST00000329231 ZNF624Q9P2J8 865 aaPredicted RBP27.14■■□□□ 1.94
ATPAF1-201ENST00000329231 ADAMTS20P59510 1910 aa27.14■■□□□ 1.93
ATPAF1-201ENST00000329231 ZNF106Q9H2Y7 1883 aaKnown RBP27.13■■□□□ 1.93
ATPAF1-201ENST00000329231 KLHL33A6NCF5 533 aa27.13■■□□□ 1.93
ATPAF1-201ENST00000329231 LILRA5A6NI73 299 aa27.13■■□□□ 1.93
ATPAF1-201ENST00000329231 H7C0S8 307 aa27.13■■□□□ 1.93
ATPAF1-201ENST00000329231 AGRPO00253 132 aa27.13■■□□□ 1.93
ATPAF1-201ENST00000329231 SUN1O94901 812 aa27.13■■□□□ 1.93
ATPAF1-201ENST00000329231 THRAP10827 490 aa27.13■■□□□ 1.93
ATPAF1-201ENST00000329231 ETS1P14921 441 aa27.13■■□□□ 1.93
ATPAF1-201ENST00000329231 BRAFP15056 766 aa27.13■■□□□ 1.93
ATPAF1-201ENST00000329231 MC4RP32245 332 aa27.13■■□□□ 1.93
ATPAF1-201ENST00000329231 SLC19A1P41440 591 aa27.13■■□□□ 1.93
ATPAF1-201ENST00000329231 HALP42357 657 aa27.13■■□□□ 1.93
ATPAF1-201ENST00000329231 DRG2P55039 364 aaKnown RBP27.13■■□□□ 1.93
ATPAF1-201ENST00000329231 SEMA5AQ13591 1074 aa27.13■■□□□ 1.93
ATPAF1-201ENST00000329231 PPP1R21Q6ZMI0 780 aa27.13■■□□□ 1.93
ATPAF1-201ENST00000329231 DET1Q7L5Y6 550 aa27.13■■□□□ 1.93
ATPAF1-201ENST00000329231 NXPE1Q8N323 547 aa27.13■■□□□ 1.93
ATPAF1-201ENST00000329231 OR52K1Q8NGK4 314 aa27.13■■□□□ 1.93
ATPAF1-201ENST00000329231 SGF29Q96ES7 293 aa27.13■■□□□ 1.93
ATPAF1-201ENST00000329231 HOMER3Q9NSC5 361 aa27.13■■□□□ 1.93
ATPAF1-201ENST00000329231 POT1Q9NUX5 634 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms